Polyodon spathula (Mississippi paddlefish): 121328416
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Entry
121328416 CDS
T07273
Name
(RefSeq) chloride channel protein ClC-Kb-like
KO
K05017
chloride channel Ka
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121328416
Ion channels [BR:
pspa04040
]
Chloride channels
Chloride channel (CLC)
121328416
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
121328416
NCBI-ProteinID:
XP_041128994
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All DBs
Position
16:5054608..5063974
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AA seq
695 aa
AA seq
DB search
MAAIMTREGGENNPETEQVLLLEKNLWKPWPRTRTKVKGCLGYVKRVLFVVGDDWIFLFA
LGVIMALISFTIDFTVNKMLTAHWWLFHELGDNMLLKFLSWSVYPIALTAFSTGFAQSVC
PESAGSGVPEVKTILTGVVLEEYLTIKNFGVKVVGMTCTLAAGSPIFLGKVGPFVHLSCM
IAAYLGRMRASATNEYENKNKQYEMLVAGAAVAVSSCFGAPVSGVLFSVEVVSSHFAVRH
YWRGFFAATCGACMFRLLAVFNSEQVTILAPFKTSFDIDFPFDLPEMIFFIILGAVCGVM
SCAYLFCQRWLLGYTRRNSIIVKLMATEKAVYSGLVALLLSSITFPYGLGQFMASRLTMK
ELLYSLFDNNTWIVLSQNASLSRPHVVDPQNLWLEWWDPTFTFYGTITFFLVMKFWMLVL
ATTMPMPAGYFMPVFLYGAAIGRLFGEVVAYFFPNGIWTDGVLNFIIPGGYAVAGAAAFS
GAVTHTLSTALLALEMTGQLSHILPVLLSVLVSNAIAQHYQPSFYDGTIMVKKLPYIPRF
WGSQKGSCMVTTNQYMNRNLAPVVKSWGFRDILNALTSSADTEFPVVESEGSMVLLGSVA
RSELLYFLQSYTGQDTVVEGTPSSGLEKNVGEVCSIQPITFQLSAQTSLYQAHELFELLN
TQLMFVTDGGKLVGFVTRTELRKAIEDLALGKTPA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgatcatgaccagggaggggggtgagaacaatcccgaaacagaacaggttctc
ctgctggagaagaacctctggaagccctggccacgcactcgcaccaaggtcaaaggctgc
ctgggctacgtgaagcgggtcctgtttgtagtcggggacgattggatcttcctcttcgct
ttaggggtgatcatggcactcatcagcttcacaatcgacttcacggtcaacaagatgctc
actgcccactggtggctcttccatgagcttggagacaacatgctgcttaaattcttgtcc
tggtcggtctatcctatcgccctgactgccttctccaccggctttgcacagagtgtgtgc
ccagagtctgcaggctcaggagtcccagaggtgaagaccatcctgacaggagtggtgctg
gaggagtatttgaccattaagaactttggggtcaaggtggtggggatgacctgcaccctg
gctgcagggagtcccatcttcctgggcaaagtgggtccgttcgtccatctgtcctgcatg
atcgcggcctacctgggtagaatgcgagcatctgcgaccaacgagtatgagaataaaaat
aagcagtatgagatgctggtagcaggtgcagctgtcgcggtgtctagctgctttggagct
ccagtaagcggggttttgttcagtgtggaggtggtgtcatctcactttgctgtcaggcat
tactggaggggattctttgcggctacctgcggggcctgcatgttccgactccttgcagtc
tttaacagcgagcaagtgactatcctcgctccctttaagaccagcttcgatattgacttc
cccttcgatctccccgagatgatctttttcataattcttggggcggtctgtggggtgatg
agctgtgcctacctcttctgccagcgctggctgctcgggtacactcgacgcaattcaatc
attgtcaagctgatggctacagagaaggctgtgtactctggactggtggccctgttgctc
tcctccatcaccttcccttatggtctgggacagttcatggcgtccaggctcaccatgaaa
gaactcctctactccttatttgacaataacacctggatcgtcctgtcccagaatgcctca
ctctcacggccccatgtcgtggacccccaaaacctgtggctagagtggtgggaccccacg
ttcactttctatggaactattacgttcttcttggtcatgaagttctggatgcttgttctg
gccaccacaatgccaatgcccgccggctacttcatgccagtctttctttatggagcagcg
attggccgattgttcggggaggtggtagcctacttttttccgaatggaatctggactgat
ggtgtccttaactttataattcctggaggatatgctgtggcaggtgcggctgccttctca
ggtgctgtgacccacactctgtccacggctctgctagctttggagatgactggtcaactc
tctcacatcctgcctgtgctgctgtctgtactggtgtctaatgccatcgcccagcactat
cagccctccttctacgacgggaccatcatggtcaagaagcttccctacataccccgcttc
tggggctcccaaaaaggatcctgcatggtgaccactaatcagtatatgaaccgtaacctg
gccccggtggtaaagagctgggggttcagggatatcctcaatgcactgacctccagcgca
gacactgagtttcctgtagtggagagtgaagggtccatggtgctcctgggttccgtagcc
cggtctgaattactctacttcctgcaaagctacacagggcaggacactgttgtggagggg
acccccagctcgggattggagaagaacgtgggggaagtgtgttccatccagcccatcact
tttcagctttcagcacagacctccctctatcaggcacatgaactgttcgagctcctgaac
acgcagctcatgttcgtcaccgatggagggaagctggtggggttcgtcacccgaacagag
ctgaggaaggcgattgaagacctggctttgggaaaaacccctgcatag
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