Polyodon spathula (Mississippi paddlefish): 121328448
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Entry
121328448 CDS
T07273
Name
(RefSeq) transcription factor HES-5-like isoform X1
KO
K06055
hairy and enhancer of split 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121328448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121328448
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121328448
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Gene cluster
GFIT
Motif
Pfam:
HLH
Hairy_orange
CENPU
Motif
Other DBs
NCBI-GeneID:
121328448
NCBI-ProteinID:
XP_041129049
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Position
16:complement(10308639..10312593)
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AA seq
225 aa
AA seq
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MCLLLFCGIRRLAAECGKPNRARDPCIHMQIVRHTYKRRALTRTRNRSARSENSASLPLS
PFAQTKMSPCNFDNELCDLKLTNKEKNKLRKPVVEKMRRDRINNSIEQLKTILEKEFQKH
EPNSKLDKADVLEMTVSFLKQQLKPEPVAPQADYNEGYSRCLQETVHFVSLCAPQKGERL
LNHFYRDRKAATSSSFPASPVTVPAGQTFTKPVVPSPERAVWRPW
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctcctattgttctgcgggattcgccgattggctgctgagtgtgggaaacctaac
cgagcaagggacccatgcattcacatgcaaatcgtgcgtcatacatacaagagaagagca
ctcactcgaaccagaaaccgctcagcgcgctctgagaactcagcgtctttacctctcagc
ccctttgctcaaacaaaaatgtcaccttgcaatttcgacaatgaactctgtgacctcaag
ctcaccaataaagaaaaaaacaaactaagaaaaccagtggtggaaaaaatgcgccgagac
cgcatcaacaacagcatcgagcagctcaagacgatcctggagaaagagttccagaaacac
gagcccaacagcaagctggataaagccgacgtcttggagatgaccgtgagctttctgaag
cagcagctgaagcctgagccggtagccccgcaggcggactacaacgagggctattcccgg
tgtctacaggagaccgtgcacttcgtgtccctctgcgcgcctcagaaaggggagcggctg
ctgaaccacttctaccgagacaggaaagccgccacgagttccagtttccctgcatctccg
gtgactgttcccgctggccagaccttcaccaagccagtggtccccagccccgagagagca
gtgtggagaccttggtag
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