Polyodon spathula (Mississippi paddlefish): 121328457
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Entry
121328457 CDS
T07273
Name
(RefSeq) peroxisome biogenesis factor 10-like isoform X1
KO
K13346
peroxin-10
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121328457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121328457
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
121328457
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
Prok-RING_4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RepSA
zf-RING_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
121328457
NCBI-ProteinID:
XP_041129062
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Position
16:complement(8247351..8251150)
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AA seq
330 aa
AA seq
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MLFRFYAMPLQPANQPQIIRSTQKDDYYQNCLRNNASEAFQTLAGSKKWLEWRREIELLS
DLAYYCLTTFAGFQTLGEEYVSILQVDPTKRKVPSRARRAALICLHVFVPYLLDRTLARL
ERELQAETAGPRAPQTRGWNLTSFFRERAQWAVGRLAETQRRTLLHATYVLRQGITFAHR
LHVALFYINGAFYHLGKRVSGVCYLRVRGLPGDDRAVRTSYKLLGAVSVLQLALTVALQI
NNFRQRQRARQEWKQYRNLASSGSSSPDLLSARTSRCVLCLEQRRHSTATPCGHLFCWEC
ITEWCNTKEECPLCREKFKPHRLVYLRNYK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgttatttaggttttacgcgatgcctctgcagcctgcaaaccaaccacagataatccga
tccactcagaaagatgactattaccagaactgtcttcggaataacgccagtgaagctttt
cagacattagctggatctaaaaagtggctggaatggaggagagagattgagttgctgtca
gaccttgcgtactactgtttgactacatttgcaggttttcaaaccctcggggaagagtac
gtcagtatcctccaggttgaccccactaagcggaaggtcccttcccgtgccagacgtgca
gctttaatctgccttcacgtctttgtgccgtatctcctggacaggacgctggcccgactg
gagcgtgagctccaagcagaaaccgcggggccccgggctcctcaaaccagaggctggaat
ctgacctcgttcttcagagaaagggctcagtgggccgtggggagactcgcagagacacag
aggaggacgcttcttcatgcgacgtacgttctgaggcaaggaatcacgtttgcacacaga
ctgcatgtagctctcttctacattaacggagcgttttaccaccttgggaaaagggtatcg
ggcgtttgctatctccgtgttcgagggttgccaggggatgaccgggctgtccgtaccagt
tacaagctcttgggcgcagtgtctgtactgcagctggcactgactgttgcgttgcagatc
aacaacttcagacagaggcaaagggccaggcaggagtggaaacaatacagaaacctcgcc
tcttctggcagttcgtctccggatctcctgtctgcccgaacctctcgctgcgtcctgtgt
ttggagcagcgacgtcactccacagccacgccctgcggccacctcttctgctgggagtgc
attacagaatggtgcaataccaaggaagagtgcccgctgtgcagggagaaattcaagccc
cacaggcttgtgtatctacggaattacaaatag
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