Polyodon spathula (Mississippi paddlefish): 121328461
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Entry
121328461 CDS
T07273
Symbol
uba1
Name
(RefSeq) ubiquitin-like modifier-activating enzyme 1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121328461 (uba1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121328461 (uba1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121328461 (uba1)
Enzymes [BR:
pspa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
121328461 (uba1)
Ubiquitin system [BR:
pspa04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
121328461 (uba1)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121328461 (uba1)
Exosomal proteins of other body fluids (saliva and urine)
121328461 (uba1)
Exosomal proteins of colorectal cancer cells
121328461 (uba1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_UFD
E1_4HB
E1_FCCH
BilD_C
DUF7243
Gp10A-like
Viral_DNA_Zn_bi
Motif
Other DBs
NCBI-GeneID:
121328461
NCBI-ProteinID:
XP_041129070
LinkDB
All DBs
Position
16:complement(23087570..23133949)
Genome browser
AA seq
1063 aa
AA seq
DB search
MSSSPLSKKRRVSESETKTGSNCSSSSSVRTEIPCTTSSTPANGMAKNGSETEIDEGLYS
RQLYVLGHEAMKRMQNSNVLISGMRGLGVEIAKNVILAGVKTVTVHDSAAAEWRDLSSQF
YLREEDLGKNRAETTQPRLAELNSYVSVSAYTGALTEEYLQQFQVVVLTNASLEEQLKIA
EVCHSSGIKLVIADTRGLFGQLFCDFGEEMIVLDPNGEQPLSAMISMITKDSAGVITCLD
EARHGFESGDYVSFTEIQGMTELNNCEPVEIKVLGPYTFSICDTSSFSDYVRGGIVSQVK
MPKKISFKSLSASLAEPEFVLTDFAKFERPGQLHVGFQALHQYQKQHGRIPKPWSQSDAE
EFVSLCKSLNESLTGSAKQEQLDEVLLKKLAYLAMGDLAPVNAFIGGLAAQEVMKACTGK
FMPIMQWLYFDSLECFPEEEEFMLSEEECAPRNCRYDGQIAVFGSKLQEKLSKQRYFLVG
AGAIGCELLKNFALIGLASGEGGEVIVTDMDTIEKSNLNRQFLFRPWDVTKMKSDTAAAA
VKQMNPEIRITSHQNRVGPDTERVYDDDFFEGLDGVTNALDNVDARMYMDRRCVYYRKPL
LESGTLGTKGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGL
FKQPAENAMQYLTDPKFLERTLKLPGAQPLEVLEAVYKSLVTDYPQSWEDCVAWARNHWQ
CQYNNNIRQLLHNFPPEQLTSSGAPFWSGPKRCPHHLEFSTSNDLHVDYIMASANLLAKT
YGVPGSRDRAALVKILDAVHVPQFTPRSGVTIHVSDQELQNANSSTDDGRLEELKSLLPK
SDCLSKFKLTAIDFEKDDDTNFHMDFIVAASNLRAENYDIPPADRHKSKLIAGKIIPAIA
TTTAAVVGLVCLELFKIVQGHKKVESFKNGFMNLALPFFAFSEPIAAPKHKYYEQDWTLW
DRFEVKGMQDDGKEMTLKQFLDYFKNEHKLEITMLSQGVSMLYSFFMPPAKLKERLSQPM
TEIVTKVSKKKLGKHVKALVFELCCNDDTDEDVEVPYVRYTIR
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcgccgctgtccaagaagcgccgcgtgtccgaatcagagacgaagacggga
tccaactgctcctcctccagctctgtgagaactgaaataccctgtacaaccagcagcacc
cccgccaacggtatggctaagaatggaagcgagaccgagatcgatgagggactgtattcc
cgacagctgtacgtgttgggccacgaggcgatgaagcgcatgcagaattccaatgtgctg
atctcggggatgagagggctgggagtggagatcgccaagaacgtcatcctggcgggagtg
aagacggtcaccgtccacgactctgcagcagctgagtggagggacctgtcttcacagttc
tacctgcgtgaggaggacctaggaaagaaccgcgctgagaccacccagccccgtctggca
gagttgaacagctacgtgtctgtgtctgcttacactggagccctcactgaggaatacctg
cagcagttccaggttgttgttctgacaaacgcctctctggaggagcagttgaagatcgca
gaggtctgtcacagcagtgggatcaagctggtgatcgctgacactcgcgggctctttggc
cagctgttctgtgattttggagaggagatgatcgtgttagacccgaatggagagcagcct
ctgagtgcaatgatttcaatgataacaaaggacagtgccggtgtgatcacttgtctggac
gaggcgcgacacgggttcgagagcggagactatgtcagctttactgagatccagggcatg
actgaactcaacaactgtgaaccagtcgagatcaaagtgctgggcccctacacgttcagt
atctgtgacaccagctctttctcggattatgttcgaggtgggattgtttcacaggtcaag
atgcccaagaagatttccttcaaatctctctctgcctccctggctgagccagagtttgtc
ctgacagactttgctaaattcgagcggccgggtcagctgcacgtgggcttccaggccctg
caccagtaccagaaacagcacggccgcatccccaagccatggagccagtcggacgctgag
gagtttgtctccctctgcaagtctctcaatgagtctctcacaggctccgccaaacaggag
cagcttgacgaggtcctgctgaagaagctggcatacctggcaatgggagacctggcccct
gtcaatgccttcatcggaggacttgcagcgcaggaggtcatgaaggcctgcacagggaag
ttcatgcctataatgcagtggctgtactttgattctctggagtgtttccctgaagaggag
gagttcatgctgtcagaggaggagtgtgcaccaagaaactgccgctacgatggtcaaatc
gctgtgtttgggtccaagttgcaggagaaactgtccaagcagcgctactttctggtgggg
gctggtgcgattggctgtgagctgctgaagaactttgctctgattggtctggcgagtggc
gagggtggggaggtgatcgtgacggacatggacaccattgagaagtcaaacctcaacaga
cagttcctgttcagaccctgggatgtgacgaagatgaagtctgacaccgcggcggctgcc
gtaaagcagatgaacccagagatccgaatcacaagccaccagaaccgggtcggtcctgac
acagagagagtctacgatgatgacttcttcgaggggctggacggagtgaccaacgcgctg
gacaatgtggacgccaggatgtatatggaccggcgctgtgtgtattaccgcaaacccctg
ctggagtctggaactctggggaccaaagggaacgtgcaggtggtcatccccttcctgaca
gagtcctacagctccagccaggaccccccggagaaatcaatccccatctgcaccctgaag
aacttccccaacgccattgagcacaccctccagtgggcccgtgacgagtttgaaggtctc
ttcaagcagccggcagagaatgcaatgcagtacctcacagaccccaagttcctggagcgc
actctgaagctgcctggtgcccagcccctggaggtgctggaagctgtgtataagagcctg
gtgactgactatcctcagagctgggaggactgcgtggcgtgggcccgaaaccactggcag
tgccagtacaacaataacatccgccagctgctgcacaacttccccccggagcagttgacc
agctctggtgcccccttctggtcaggaccaaagagatgccctcaccacctggagttcagc
accagcaacgaccttcacgtggattacatcatggccagtgctaacctgttagccaagaca
tacggtgtgcccggttcccgcgaccgtgctgccttggtgaagatcctggacgctgtgcat
gtgccgcagttcactccacgctctggagtcacgatccacgtgtctgaccaagagctgcag
aacgctaactcctccaccgatgatggcaggctggaagagttgaagagccttctacccaaa
tcggattgtctgtcgaaattcaagctgactgctattgactttgagaaggatgatgacaca
aatttccacatggatttcattgtcgcagcatcgaacctcagggcagaaaactatgacatc
cctccagcagaccgacacaagagcaagctgattgctgggaagatcatccccgctattgcc
acgacgacggcagcagtggtgggcctggtgtgtctggagctgttcaagattgttcagggc
cacaagaaagtggagtccttcaagaacggcttcatgaacctggcactgcccttcttcgca
ttctccgagcccattgcagcgcccaaacacaagtactatgaacaggactggactctgtgg
gatcgcttcgaggtgaagggaatgcaggacgatgggaaggagatgacactcaaacagttc
ctcgactacttcaagaatgagcataaactggagatcaccatgctctcccagggagtgtcg
atgctgtattcattcttcatgcctcctgccaagctaaaggagcgactctcacagccgatg
actgagattgtgaccaaggtctccaagaagaagcttggcaagcacgtgaaggctctggtg
ttcgagctctgctgtaatgatgacacggacgaggacgtggaagtgccctacgtgcgatac
accattcgctga
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integrated database retrieval system
