KEGG   Polyodon spathula (Mississippi paddlefish): 121328496
Entry
121328496         CDS       T07273                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 5C-like
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pspa01009]
    121328496
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pspa03036]
    121328496
Enzymes [BR:pspa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     121328496
Protein phosphatases and associated proteins [BR:pspa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121328496
Chromosome and associated proteins [BR:pspa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121328496
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD PHD_4
Other DBs
NCBI-GeneID: 121328496
NCBI-ProteinID: XP_041129114
LinkDB
Position
16:complement(20753608..20772838)
AA seq 1548 aa
MESDEFVPPPECPVFEPTREEFADPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVDVDN
FRFTPRIQRLNELEAETRVKLNYLDRIAKFWEIQGSSLKIPNIERRILDLYSLGKIVMEE
GGYETVCKERRWVRVAQRLGYPPGKNIGSLLRSHYERIVYPFEMFQSGGNLTQLKSRQLY
DSEDKDKEYKPHSIPLRQSVPPSKIINLGRRANRLQPDPEPTEEDIEKNPELKKLQIYGA
GPKMMGLGLVPRDKALRKKDELPQTVVVKDSVGVKEEPLSPPPGPDEDVKPSGDSLQPDV
KPESPSQEEPCTKMTMRLRRNQTNTQIVDSFVCRMCSRGDEDDKLLLCDGCDDNYHTFCL
LPPLSETPKGDWRCPKCVAEECTRPAEAFGFEQATREYTLQSFGEMADAFKADYFNMPVH
MVPTELVEKEFWRLVSSIEEDVTVEYGADIHSKDFGSGFPMNNGKRKLAPEEEEYARSGW
NLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSTFCWHIEDHWSYSINYLHWGEPKTW
YGVPSSSAERLEEVMKKLTPELFESQPDLLHQLVTIMNPNILMGYGVPVVRTNQCAGEFV
ITFPRAYHSGFNQGYNFAEAVNFAAADWLPAGRRCIEHYRRLRRYCVFSHEELTCKMAAC
PERLDLNLAAAVHKEMFIMVQEERKLRKALLDKGITEAEREAFELLPDDERVCDKCKTTC
FLSALACYSCPDRLVCLNHMDELCACPPERHYLRYRYTLDELPTMLHKLKLRAESYDIWA
GKVKQALDMEDGRKRAVEELRALCSEAADKKFPDNELLYRLRGTISEAERWVSESAVLLG
KTRRHTGLPKMTVAELKTFLDQMQTLPCILSQIPEVQAVLSAVELYQGSAQALLQGAALS
PAAPSQIQALLEQGASLPVEAPEVEQLRGLLEQGRWLAEVKRALASAGSQVTLEVMRSLM
EAGCSVPQSAAVENAMAELQELLTIAESWEEKAGICLEARQKHPPATMEAIIKEAQNIPV
QLPKILALSEALSKARAWTADLEEIQNGEHFPCLDDLEGLVAIGRDLPVRMEELRHLELQ
VVTAHSWREKASKTFLKRNSCYSLLEVLCPCADASSDSVKRSKWRRRVRERDCSLLYKSD
IDSLGLSAQDLRDPGSIVSAFKQGEQKEKEGIRRLQKINLSKTCPSGRVSEGEGSGDAPT
TTPPSSXAPGGRRVGGTPLWGPPLHGARPPMLRCQLCRDLFHSGCVSFPKLLPQTSPSPA
ASSPPSPVLCWWDWDSRFLCPLCQRGRRPRLETILALLVALQRVPVRLPEGEALQCLTER
AINWQSRAAAALASPELQGALEKLAQLQDRLAGREEGLSSGTGSAGKGHGEDRTEREEGH
SQEDSRDGMKREDENTSADTKSSQENGHSRTENYSSGVTDIEQLHALLPLLEGPVIELSP
QAREELEELQMEGDLLEVSLDQSQSIWRVLQAAQKPPLDTLATIIEAERMESRSGGRARA
KDSDKRRKRKCGGRGEGLLSVSRDRFETKKTKGEAAQPLHSSNGVGIL
NT seq 4647 nt   +upstreamnt  +downstreamnt
atggagtcggacgagttcgtgccgcctccggagtgtcccgtcttcgaacccacccgggag
gagttcgcagaccccctggggtacatcgccaaaatccgccccatcgcagagaaatccgga
atctgcaagatcaggccaccggcggactggcagcccccctttgcagtggatgtggataac
ttcaggttcactccccgaattcagagactcaatgagctggaggctgagactcgtgtgaag
ctgaactatctggatcgcatcgcaaagttctgggagattcaggggtcctctctgaagatc
cccaatattgagagacgcatactggacctctacagcctgggcaagatagtgatggaggag
ggaggctacgagactgtctgtaaggagcgacgctgggtgcgagtggctcagagattgggg
tacccccccggcaagaacatcggctccctgctgcgctcgcactacgagaggatcgtgtat
cccttcgagatgttccagtcggggggcaacctcacgcagttaaagtcccggcagctgtat
gacagtgaagacaaggataaggagtacaaaccccacagcatccccctgcggcaatctgta
cccccatccaaaatcatcaacctggggcgccgggccaaccggctgcagcctgaccccgag
cccacagaggaggacattgagaagaatcctgagctgaagaagctgcagatctacggagcc
gggcccaagatgatgggtctgggactggtgccccgagacaaggccctgaggaagaaagat
gagctcccccagactgtggtggtgaaggacagtgtgggggtgaaggaggagcccctctcc
cctcccccggggcccgacgaggacgtcaagccctcgggggactccttgcagcccgacgtg
aagccagagagccccagccaggaggagccctgcaccaagatgaccatgcgactgcgacgc
aaccagaccaacacacagatcgtggactccttcgtgtgtcggatgtgctctcgcggggat
gaggatgacaagctgcttctgtgtgacggctgtgacgacaactaccacaccttctgcctc
ctgccccctctctccgagacccccaagggggactggcgctgccccaagtgtgtggctgag
gagtgcacccgccccgcggaggcgtttgggtttgagcaggcgactcgggagtacacgctg
cagagctttggggagatggccgatgccttcaaggcggattacttcaacatgcctgtccac
atggtccccacagagctggtggagaaggagttctggcggctggtcagcagcatcgaggag
gacgtgacggtggagtacggagctgacatccactccaaggacttcggaagcggattccca
atgaacaacgggaagaggaagctggcaccggaggaggaggagtacgcccgcagcgggtgg
aacctgaacgtcatgcccgtgctggatcagtctgtgctctgccacatcaacgctgacatc
tcgggtatgaaggtgccctggctgtacgtgggcatggtcttctcaaccttctgctggcac
atcgaggaccactggagctactccatcaactacctgcactggggggagcccaagacctgg
tatggggtcccctcatcatcagcagagcgtctagaggaggtgatgaagaagctgaccccc
gaattgtttgagagccagccagacctgctgcaccagctcgtcaccattatgaaccctaac
atcctgatggggtatggggtgccggtggtgcgtaccaatcagtgtgcaggggagtttgtg
atcaccttccccagggcttaccacagcggcttcaaccaagggtacaactttgcagaggca
gtgaacttcgctgccgcagactggctccctgcaggacgtcgctgcattgagcattatcgc
cggctgcgtcggtactgtgtgttctctcacgaggagctcacctgcaagatggcggcctgc
ccggagagactggacctcaacctggctgccgcggtgcacaaggagatgttcatcatggtg
caggaagagaggaagctgaggaaggcgctgctggacaagggtatcacggaggcggagcgc
gaggcgtttgagttgctcccggatgacgagcgggtttgtgacaaatgcaagaccacctgc
ttcctgtcagcgctcgcctgctacagctgccccgaccggctggtgtgccttaatcacatg
gacgagctgtgcgcctgtcccccagagagacactacctcaggtatcgctacaccctggat
gagctgcccaccatgctgcacaagctgaagctgagagcagagtcctacgatatctgggca
ggcaaggtgaagcaggccctggacatggaggacgggaggaagagagcagtggaagagctg
agagccctgtgctctgaagctgctgataagaagtttcctgacaatgagctgctgtaccgg
ctgcgtggcacgatctccgaggcagagcgctgggtgagcgagagcgccgtcctgctgggg
aagacacgcagacacaccggcctgcctaagatgacggtagctgagttgaagacgttcctg
gatcagatgcagacgctgccctgtatcctgtcccagatccccgaggtgcaggccgtgctt
tcggcagtggagctgtaccagggcagtgctcaagctctcctgcagggggcggcgctctcc
cctgcggccccctctcagatccaggccctgctggagcagggggcttccctgcctgtggag
gcccccgaagtggagcagctgagggggctgctggagcaggggcgttggctggcggaggtg
aagcgggccctggcctcggcggggtcgcaggtcaccttggaggtcatgaggtcgctgatg
gaggcggggtgcagcgtgccacagagcgctgccgtggagaatgccatggccgagctgcag
gagctgctgaccattgcagagagctgggaggagaaggctggtatctgcctggaggccagg
cagaagcacccccccgccaccatggaggccatcattaaggaggctcagaacatcccagtg
cagctgcccaaaatcctggcactcagcgaggccctgagcaaggcacgggcgtggaccgcc
gacctggaggagatacagaatggagagcacttcccctgcctggatgatctggaggggctg
gttgcgatcggcagggacctgcctgtgcgcatggaggagctgcggcacctggaactgcag
gtggtgaccgctcactcctggagagagaaggcaagcaagaccttcctgaagaggaactcc
tgctacagcctgctggaggtgctgtgcccttgtgctgatgccagctcagacagtgtgaag
cgttccaagtggaggaggcgggtgcgggagagggattgctccctcctgtataaatccgac
atcgacagcctgggtctatcagctcaggatctccgggatcccggctccatcgtctctgcg
ttcaaacaaggcgagcagaaagagaaggaaggaatccggcgactgcagaagatcaaccta
tcgaagacctgccctagtggacgggtctccgagggagaggggagtggagacgcccccacc
accacccccccctcttccnctgcccccggggggagacgtgtgggggggacacccctgtgg
ggcccccccctacatggggcgcggccccccatgctccgctgccagctctgcagagactta
ttccacagcggttgcgtttcttttcccaaactcctcccccagacctcccccagccccgcc
gcctcctctcctcccagtccggtgctgtgctggtgggactgggattccaggttcctgtgc
ccgctctgccagcgcggtcggcgccccagactggagaccatcctggccctgctggtggcc
ctgcagcgggttcctgtgcgcctgccggagggagaggctcttcagtgcctcaccgagagg
gccatcaactggcagagccgcgccgcggccgcgctggcttcccccgagctccagggggca
ctggagaagctggcgcagctgcaggacaggctggctgggcgggaggaaggcctgtcaagt
ggtactgggagtgctgggaagggacacggtgaagacaggacagagagagaagaggggcac
agccaggaggacagcagggatgggatgaaaagggaggacgagaacacgagtgcagacaca
aagtcctctcaagagaacggacactcaaggacggaaaactacagctctggtgtgacagat
attgagcagctgcacgccctgttgcccctccttgaaggcccagtgatcgagctttccccc
caggctcgtgaggagctggaggagctgcagatggaaggggatctcctggaagtgtcattg
gatcagagccagtccatctggagagtcctgcaggcagcgcagaaaccccccctggacacg
ctggccaccatcatcgaggccgagaggatggagagtcggtccggggggagggctcgagcg
aaggactcggacaagaggaggaagaggaaatgtggaggaagaggggaggggctcctgagc
gtctcgagggacaggtttgagacgaagaaaactaaaggggaggcggcacagcctctgcac
agcagcaatggagtggggatcttgtga

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