Polyodon spathula (Mississippi paddlefish): 121328522
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Entry
121328522 CDS
T07273
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121328522
03036 Chromosome and associated proteins [BR:
pspa03036
]
121328522
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121328522
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
121328522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
IQ_SEC7_PH
CFAP43_N
WD40_CDC20-Fz
Beta-prop_EML_2
DUF7675
Motif
Other DBs
NCBI-GeneID:
121328522
NCBI-ProteinID:
XP_041129151
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Position
16:15026003..15097797
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AA seq
1295 aa
AA seq
DB search
MATEPSEDRKESEEEEEDEDQGEKFDFEESANEDDKMGSPTKKDNEQTVHGTQETVELNS
DPNPQTDLRTSPTEQAQQPSRMRNPESDSPPAGQEDPTAPPISSVQPAGPSLAASEATGG
VSTSTEPKISEQEEAPGVSKDKSEGLSWKRNSIYDAQSTPAVEPGTESPEVIYDDVPCEN
IQPKTEDELVYEDVQHEEEPGPQDGWSTSEFESYDEQSEEESESKLSARSKLSPDVRGLK
ERCARTKRELLAMRLGRRDVSQIKQSYDWKVHQLMKAARNGTKDGLEKTKIAVMRKVPFL
LKKDIQDEMEDDAGYLDVALSESKHPPPELCPMPDGLTNQQIIRRHILGSIVQSERNYLE
SLKRILQEYQKPLLELEPRMLSTKKVRLVFFRLREILQCHSMFQIALSSRVAEWDLNEMI
GDLFVASFSKSMVLDVYSDYVNNFTNAMALIKKACISKPAFLEFLKKKQAASVDRITLYG
LMVKPIQRFPQFILLLQDMLKNTPKGHQDRLPLQLALTELETLAEKLNEQKRVADQIAEI
QQLAKSVSDRTLNKLLSAGQRQLILCETLIEMVYGDRGQVLKSKERKVFLLNDTLICANI
NIKGPPDLGSLVPIGLKYTMKWSAPLLQVQVVEVGQEGSVQNQETMFQQCGARRPSGTSI
TGKVFLGPPRLYQELQEMQHDLDVVDQISQLVRTLQGTYQNLNSAVSQDWSLSLQRLIRM
KEDEIQTANKCRLRLLVPGKSDKSGRPVSFMVVFNTPSPLSKISWVNRLHLAKIAQREEN
MPGWFSAEDDVKTKAPFWCPLLACRVPVFPSKAQEMKLEAALHNPVQCALLGFSAASTSL
PQGYLWVASGGDVSHGQVEIFSLNRSTPRAVKSFQVGAPVLCLEYVPEESQSEEGESGAA
ERTSMFGNTICLGLQDGSILVYGSVDTAAQCLLTFRNPEGCPVLCLKHSGNFLFAGLKDG
KVVVYRRKSSEKLWDPESPRCSSIGTEPVRRLLALEDTVWASCGNRIIVIEGATMNTLGF
EAHQDKAVSVAHMARAGGGVWMAFSEGSSIRLFHTETLEPLQEINISARTTFLGPAQKSM
RVTSLLVCQGLLWVGTSQGIIVTLPVPKLEGIPKITGKGMTSLNAHCGPVDFLVATSSTL
SPQLLKRDSMGDEVDSPSRGEGKTNTSSQESLHQVNGSSRREGKGQGVLLQYRLRSTSQL
PGKPLSSKPEGASDSSLESLEHSVEDGSIYELSEDPEVWVRGRPSAREGGRKDRVTSAAV
ISGGRGFRSLGGGGESSTGRESESILMVWQLPLTV
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagaaccctcagaagacaggaaggagtcggaggaggaagaggaggatgaagat
cagggggagaagtttgattttgaggagagtgccaacgaggacgacaaaatgggcagtccc
acgaaaaaagacaatgagcagactgtccatggtacacaagagacggtggaactgaactca
gaccccaaccctcagacagatctgcgaacctctcccactgaacaagcacaacagccttcc
agaatgagaaacccggaatctgactcgccccctgctggtcaggaggaccccacagcacct
ccaatctcctctgtacaacctgccggcccaagcttggcagctagtgaggcaacaggagga
gtttcaacttccactgaaccaaagatttcagagcaagaggaggctccgggagtctctaag
gacaaatcagagggtctttcctggaagagaaacagcatctatgatgcccagtccacgcca
gcagtggagcctgggacagagagccctgaagtgatctatgatgatgttccttgtgagaat
atccagcccaagacagaagatgagctggtctatgaagacgtgcagcacgaggaggagcca
ggcccccaggatggctggagcaccagtgagttcgagagctacgatgagcagtctgaagag
gagagtgagagcaagctctccgcgcgcagcaagctctccccagacgtgcggggcctgaag
gaacggtgcgcccggaccaagcgcgagcttcttgctatgaggctggggcgccgtgacgtc
agccagataaaacagagctatgactggaaggtacatcagctaatgaaagccgccagaaat
ggaacgaaagacggactggaaaagacaaaaattgctgtcatgagaaaagtccccttctta
ctgaagaaggatattcaagatgagatggaggatgacgctggctacctggatgttgccctc
tcagagtccaaacacccccctcccgagctgtgccccatgccagatggattgaccaatcag
cagattataagacgtcacatcctgggctccatcgtgcagagtgagcgcaactacctggaa
tcactcaagagaatcctgcaggagtaccagaagccactgctggagttggaaccgcgcatg
ctgagcacaaagaaggtccggctggtattcttccgcctgcgtgagattctgcagtgccac
tccatgttccagatcgcactgtcgtcccgcgtggccgagtgggacctcaatgagatgata
ggtgacctctttgtggcatcgttttccaagtccatggttctggatgtgtacagcgattac
gtcaataacttcacgaatgccatggctctgattaaaaaggcttgcatctccaaacctgct
ttcctggaatttctcaagaaaaagcaggctgccagtgtagaccggatcactctgtatggc
ctgatggtgaaacccatccagagattcccccagttcatcctcctgctgcaggacatgctg
aagaacactccaaagggacatcaggacaggctgcctctgcagctggccctcacggagcta
gagacactggctgagaaactgaatgagcagaaacgcgtggccgaccagattgcagagatc
cagcaactagccaagagcgtcagtgaccgaacgctgaacaagctgctcagcgcaggccaa
cgccagctcatcctgtgcgagactctcattgagatggtgtacggggatcgggggcaggtc
ctcaagtccaaggagcgcaaagtgtttctcctcaatgacaccctcatctgtgccaacatc
aacatcaaggggccccctgacctcggcagtcttgttcccattgggctgaagtacaccatg
aagtggagcgcccccttgctgcaggtgcaggtggtggaggtggggcaggagggcagtgtc
cagaaccaggagacaatgttccagcaatgtggggccaggagaccctctggcacaagcatc
acaggcaaggtgttcctggggccccccagactctaccaggagctgcaggagatgcagcat
gacctggatgtggtggatcagatttcccagctcgtccgcacgctgcagggaacctatcag
aacctgaactctgcagtgtcccaggactggagcctgtccctgcagaggctcatccgcatg
aaggaggatgagatccagaccgctaacaagtgccgcctgcggctgctggtacctgggaag
tcagacaagtctggacggccggtcagtttcatggtggtcttcaacactcccagccccctc
agtaaaatctcctgggtcaacaggctacacctcgccaagattgcacagagagaagagaat
atgccaggctggttctccgcggaggatgatgtaaagaccaaagcccctttttggtgccca
cttcttgcctgccgtgtcccggttttcccttcaaaagctcaggaaatgaaactggaagct
gccctccataatccggtccagtgtgcacttctggggttttccgctgccagtacttcccta
ccacaaggctacctctgggtggccagtgggggtgatgtttctcacggtcaggtggagatc
ttctccctcaacaggtctactccccgtgctgtcaaatccttccaggtgggggcaccagtg
ctgtgtctggagtatgttcctgaggagagccagtccgaggagggggagagtggggctgct
gaacggacctccatgttcggcaacacaatctgtttggggctacaggatggcagtatccta
gtttatggcagtgtggacacggccgcccagtgcctgctaaccttccgtaaccccgaggga
tgcccggtgctgtgcctgaaacattccggcaacttcctgttcgcggggttgaaggacggg
aaggttgtcgtctacagacggaagagcagtgagaagctgtgggatccagagtcccctcgc
tgctcaagtatcggcacagagccggtccgcaggctgctggctctggaggacactgtgtgg
gccagctgtggaaacaggatcattgtcattgaaggagccaccatgaacaccctgggtttt
gaagcacaccaggacaaggcggtgagcgtggcccacatggcgcgcgccgggggcggggtt
tggatggcgttttccgagggctcgtctatccgcttgtttcacaccgagacgctcgagccc
ctccaggaaatcaacatctccgcccgcaccaccttcctcggcccagctcagaagagcatg
cgggtgaccagtctgctggtttgccaggggttactgtgggtcggcacttcccagggaatc
atagtcacactgccagtgcccaagctggagggcatccccaaaataacagggaaaggaatg
acctctctcaacgctcactgcgggccggtggatttcctggtggccacctctagcacgctg
tccccacagctgctcaagagggactccatgggggatgaggtggactcgcctagtcggggg
gagggcaagaccaacacctcctcccaggaatccctgcaccaggtcaatggcagctccagg
agggagggcaagggccagggggtcctgctgcagtaccgcctgcgctccacctcccagctc
cctggcaaacccctgagcagcaaaccagagggagcgtcggactcgtctctggagtccctg
gagcacagtgtggaggacggctccatctacgagctcagcgaggacccagaggtgtgggtg
cgaggcaggccctcagcccgggaggggggccggaaagatagggtcacttcggctgccgtc
atctccggggggagaggcttccgtagcctgggagggggtggcgagagcagcacaggcaga
gagtcagagagcattctcatggtttggcagctccctctcactgtgtag
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