Polyodon spathula (Mississippi paddlefish): 121328549
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Entry
121328549 CDS
T07273
Name
(RefSeq) PR domain zinc finger protein 2-like isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00310
Lysine degradation
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121328549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121328549
03036 Chromosome and associated proteins [BR:
pspa03036
]
121328549
Enzymes [BR:
pspa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
121328549
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121328549
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121328549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_11
zf-C2H2_ZNF462_1st
zf-H2C2_2
zf-C2H2_8
zf-C2HE
zf-C2HC_2
Zap1_zf1
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
121328549
NCBI-ProteinID:
XP_041129198
LinkDB
All DBs
Position
16:complement(16894689..16931922)
Genome browser
AA seq
1794 aa
AA seq
DB search
MEESQEGLKEENGKPSISSILSQEQTAIIQELVSQEQLPLAVSGSPSSISEDLSQEEVDE
EEEEEKQVETPVEKGQPPPEPEVMESDEEPAPIPSPQEDMEQDEQLQQDPVSSSPKPQGD
PNSELQEGFLYPCQHCERRFTTKQGLERHMHIHVSTASHSFKCRYCGKAFGTQINRRRHE
RRHEAGPKKKLGALYSPQLPIESSSPDLVAPSGNFIIMGSQNRGNLQDSFESDKQSPAEV
ERAVDLNENGDPRDLHPCKYCKKVFGTHTNMRRHQRRIHERHLLPKGVRRKGTLLQETQQ
QQVPPQEELVNPSPPPVYVPSGDLEDEGDPDEEYMVNISSNISENLSLYIDGKILSTSSM
SNCEVIEVDPSSATLYSLDALIVTSDNVSQDFQVEATNCTVKEVPRAGQPAIKRRTTSPP
LLTKIKTEGDPEPIMPSSSSSSSSSSSSSSLMGQLYPQVTDSLAFQKEKTVYLSPKLKQL
LQTQESHKPGLFTEGHRLGPPLMSVTTLPSGSGRFKRRTASPPNSPQHSPVLRVDTGKPG
TEVGPPFPLKVPKLESHCSSPAWSLSSRDERDTVSPLGVDSYKTSPVDWLTGRSAGSSCN
QQPLDLSNGVKQKTECKSKGQAVVEAVLDLSMHRKSSPGGETKRIGGPQLLIRKKKPNTC
MLQKVLMNEYGGLDSAMETAEEIHNTEGSPNHHPDADLVMDASSAPLSPLHNALSPDTAV
ASALHPPPPSLTPVILHPLSPSTPTLTAPTPPLPVLPTAPSPLPDMFPTPLSSSSSPSSP
LPVLSPKASPNPVDTSPLESSSAPLLDPSPFLLDASVVCSIAPLDSLPDQVNPLDPNPIS
LQVDTTLALEDPSAGPVDPAHLTALSPLQKKADTLSLTTDPSPSSADPSSNPLNVSTDLL
CPVSAPQLPLQCPVDPVPALGPYPTPIPQEPAEHLLIPTTMIKQEEQQQQAPLRSSPLHS
PDLPVLVASVPVPSPSSSPAPTLPPLLISEILPLPPLQPDSITTKKKCGDMEQPADVVSL
TSAVTPTPPVSSLQEAPYTEEFPRQQMFCKNFVCNVCEAPFPSIKELSRHITVHSEEWPF
RCEFCVQLFRDANVLLEHRSTLHGVGRIYVCSLCSKEFAFLCNLQQHQRDQHPDKDCTHI
EMESGKLRPQNYTDPSRASLEPPIPPAGDCDAYAQGATSPQTRLSFENRKVKEEDEEEPN
DSSEELYTTIKIIASGESKPKGPDVRLGINQHYPSFKPPPFPYHNRTPAGSVASATNFTT
HNIPQTFSTAIRCTKCGNSFDNMPELHKHILACASASDKKRYTPKKNPVPLKQIVKPQNG
LFSAVAAGGNGSGQNAFRRMGQPKRLNFSQEPSNKMKLSALNKKKNQLVQKAIYQKNKSA
ATAKKASSLAQEEPETHVCPHCSREFTYVGSLNKHVAVSCPRKPASSKKAKKGSSSSGGG
HSFQDKNDNLRRRTADSEIKLQGSQAKLGKTRARSSGPAGNMASPSKTQPSKHKTAPQIR
QKRPSSFHSSSVPYSKKSKMSPKSSPQQHPSLPAALGSGSEKLVMRMQKKVTEAKAQQQP
QPQQQLQLKKEERFSVKMRERSGGPVTRSLQLASSTAQSDVKGEDVSANQESREPQAFQG
NCAALKASYQVSLRIAKEKKPNAIREDLIKPCVKNICKSLLGGAAARKVDSITLSNDTVA
KGIQDMSCDIQKAVVEKIQHYKRFALQLDSVSGLPQVMGFVRFVSDGDIQEEILFCDHLD
KTTKGETIFRLVDSNLKNLHVEWSDCVGICTNGAKSMVGYKSGFIAQFKNLHLM
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatcccaagagggtcttaaggaagagaatgggaaaccttcaatctcgtccata
ctgtcacaggagcaaactgctatcattcaggaactggtgagtcaagagcaactgcctttg
gcagtgagtgggtctccgtctagcatttctgaagatctatctcaggaagaagtggatgaa
gaagaggaagaggaaaaacaggtggagacacctgtagagaagggccagcccccacctgaa
ccggaagtgatggaatctgatgaagagccagcacccatcccaagccctcaggaagacatg
gagcaggatgagcagctgcagcaggaccctgtctccagttcaccaaagccccagggagac
ccaaatagtgagcttcaggaaggtttcctgtacccctgtcagcactgtgagcgtcgcttt
accaccaagcaggggctggagcgtcacatgcacatccatgtctccacagccagccactct
ttcaagtgtcgctattgtgggaaggccttcggcactcagatcaaccgtcggcgccacgag
cggagacacgaggccggacccaagaagaaactaggggcgctctacagcccccagctgcca
atagaaagctcaagtccagatctcgtcgccccttctggaaatttcatcataatgggctcc
cagaacagagggaaccttcaggattcatttgagtctgacaaacagagccctgcagaggtg
gagagggcagtagacctaaatgaaaatggagatcccagggacctgcacccgtgcaagtat
tgcaagaaagtgtttggcacccacaccaatatgcgacggcaccagcgcaggattcacgaa
cgccacctactcccaaagggagtccggcggaaaggaacgctgttgcaggaaactcaacag
cagcaagtacctccacaagaagaactggtgaaccccagtcctcccccagtctatgtgcca
agtggggacttggaagacgagggggatccggatgaggagtatatggtgaacatctccagc
aatatttcagagaacctcagtctctacattgatgggaagatcctatcaaccagcagcatg
agcaactgtgaagtcatcgaggtagaccccagctctgccactttgtacagcctagatgct
ttgatcgttacctctgataatgtgtcacaggactttcaagtggaggccaccaactgcact
gtgaaggaggttcccagagcagggcaaccagcaataaagaggcgaaccaccagtccacct
ctgcttacaaaaattaaaacagaaggggatcctgaacccataatgccttcctcctcctca
tcttcatcatcctcatcctcatcctcttctctgatgggacagctctacccacaggtcact
gacagtttagccttccagaaggagaaaacagtttacctgtccccaaaactcaagcagctc
ttgcagacccaagagagccacaagccaggtttgttcactgagggacatagacttggaccg
cccttaatgtcggttaccactttgccatctggctcagggaggttcaagagaaggacggct
tcccctccaaactctccacagcacagcccagtgcttcgagttgacacagggaagcctgga
acagaggttggacctccgttccccctcaaggtgccaaagctggagagccactgcagctca
ccggcctggagcctgtcaagtcgagatgaaagggacaccgttagcccactcggtgtggac
tcttacaaaacctcacctgtcgactggctgactgggagaagtgcaggaagctcctgcaac
cagcagcccttagacctttccaacggggtcaagcagaaaactgagtgcaaatccaaggga
caggctgttgttgaagctgtactggacctcagcatgcacaggaagtcctcccctggggga
gaaacaaagagaatcggaggcccccagcttctaatcagaaagaagaaacctaacacctgc
atgcttcagaaagtgttaatgaatgagtacggcggattagacagtgcaatggagactgca
gaagagatacacaatacagaaggcagccccaatcatcatcctgatgctgatttagttatg
gatgcctcttccgctccgctttcaccactccacaatgcactttccccagacacagctgtt
gcatctgcacttcatcctcccccaccttcactaactcctgtgatcttgcacccactgtcc
ccttctactccaaccttgactgcccccaccccacctctgccagttctgcccactgccccg
tcacccctcccagacatgtttcccactccattgtcctcctcctcatctccttcatcccct
cttccagttttgtcccccaaagcctcacctaatccagtcgatacatctccattggaatcc
tcatccgctccacttttggatccctccccctttctactggatgcatctgtggtttgcagc
atcgctccccttgattccctaccagatcaagttaatcctttagatcccaatcccatatct
ctccaagttgataccacccttgctcttgaagatccctcagcaggcccagtggatcctgca
catctcactgctttgagtcccttacagaaaaaggctgatacgttgtctttaactacggat
ccttcaccaagctccgctgatccctctagtaaccccctgaatgtctcaactgacttgcta
tgtcctgtgtcagctccccagctaccattacagtgccctgtggatccagttccggctttg
ggtccataccctactcccatcccacaggaacctgcagaacaccttctaattcccaccacc
atgatcaagcaagaggaacaacagcagcaggcaccactccgttcttcccctctacactca
ccagacctgcctgttcttgtagcttcggtcccagtccccagccccagctcctctcctgct
ccaactctgcctcccctcttgatctcagagatcttacctttaccaccactccaaccagac
tcaattacaacaaaaaaaaaatgtggagacatggagcaaccagctgatgttgtctcgctt
acctctgcggtcactcccacacctcctgtttcttctctgcaggaggccccttatactgag
gaattccccaggcagcagatgttttgcaagaactttgtgtgcaatgtctgtgaggccccc
ttcccctccattaaggagctgagccgccacatcacggtgcactctgaagagtggcccttc
aggtgtgagttctgtgtgcagctcttcagggacgcaaacgtcctgctggagcaccgttcc
accctgcacggtgtaggcaggatctatgtttgctccttgtgcagcaaggagtttgccttc
ctctgcaacctccagcagcaccagagggaccagcaccctgataaggactgcacacacata
gagatggagagtggcaaactcaggccacagaactacactgaccccagtcgagccagtctg
gaaccacccatccctcctgctggagactgtgatgcctatgctcaaggagccacttctcct
cagacacgtcttagttttgagaataggaaggtgaaggaggaggatgaggaggaacctaat
gactccagtgaggagctctacactacaatcaagatcatagcatctggagagagcaaaccc
aaggggccggatgtgcggctgggtatcaaccaacactaccctagtttcaagccaccccca
tttccttaccacaaccggacgccagctgggtctgtggcctcggctaccaatttcactacc
cacaatatcccgcagacctttagcacggctatccgctgcacaaagtgtggcaacagcttt
gataacatgcccgagctacacaagcacatcctagcctgtgcctcggccagtgacaaaaaa
cgttacacccccaagaagaaccctgtccccctcaaacagatcgtcaagccacaaaacggg
ttgttttctgcggtggcggctggaggtaatggttctggtcagaatgctttccggaggatg
ggccaacccaaaaggcttaacttcagccaggagccgtccaacaagatgaagctgagcgcc
cttaacaagaaaaagaaccagctggttcaaaaggccatctaccagaagaacaaatctgct
gccactgcaaaaaaggcctccagccttgcccaggaggagccagaaactcatgtctgcccg
cactgcagccgggagttcacctatgttgggagcctaaataagcatgtggctgtgagctgc
cctcggaaacctgcttcttcaaaaaaagcaaagaaaggtagcagcagcagtgggggtggc
cactctttccaagataagaacgataacctccgcagacgaactgctgactcggagattaaa
ctgcagggctcgcaagccaagctaggcaaaaccagggcccgcagttcaggaccggcaggc
aacatggcctccccttcgaaaacacaacccagcaaacacaaaactgccccacagatccga
caaaagcgtccatcttctttccattctagttcagtcccgtacagtaagaaaagcaaaatg
tcacctaagagcagcccccagcagcatccgtctctacctgcagccctgggcagtggatct
gagaaactggtcatgagaatgcaaaaaaaggtgaccgaagccaaagcacagcagcagcca
cagccacagcaacagttacagctgaagaaagaagagcgattttctgtgaagatgcgagaa
aggagtggcgggccagtcacccgcagtttacagctggccagcagcacagcacagagcgat
gtcaagggggaagacgtcagtgcaaaccaggaatccagagagcctcaggcatttcaagga
aactgcgcagccctgaaagcatcttatcaagttagtctgcgcatagcaaaggagaaaaaa
ccaaacgctatacgagaggatcttatcaagccttgtgttaagaacatctgtaaaagtctg
ttaggtggagcagcagccaggaaagtagattcaatcaccctctcaaatgatacagtagca
aaagggattcaggatatgtcctgtgatattcagaaagctgttgtagagaaaatacagcac
tacaaaagatttgctcttcagttggacagtgtatctggactgcctcaggtaatgggattt
gtaaggtttgtgagtgatggagatattcaagaggaaattcttttttgtgatcacttagat
aagaccactaagggtgagacaattttcaggttagtggattcaaacttgaagaacttgcac
gtggagtggagtgactgtgtcgggatctgtacaaatggtgccaagagtatggtgggttat
aaatcaggctttattgctcaatttaaaaacttgcacctgatgtaa
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integrated database retrieval system
