Polyodon spathula (Mississippi paddlefish): 121328550
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Entry
121328550 CDS
T07273
Name
(RefSeq) PR domain zinc finger protein 2-like
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00310
Lysine degradation
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121328550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121328550
03036 Chromosome and associated proteins [BR:
pspa03036
]
121328550
Enzymes [BR:
pspa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
121328550
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121328550
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121328550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_11
zf-C2H2_ZNF462_1st
zf-H2C2_2
zf-C2HE
zf-C2HC_2
Zap1_zf1
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
121328550
NCBI-ProteinID:
XP_041129201
LinkDB
All DBs
Position
16:3030803..3052605
Genome browser
AA seq
1622 aa
AA seq
DB search
MEESQEGLKEENGKPSISSVLSQEQTAIIQELVSQEQLPLAVSGSPSSISEDLSQEEVDE
EEEEEKQVEIPVEKGQPPPEPEVMESDEEPAPIPSPQEDMEQDEQLQQDPVSSSPKPQGD
PSSELQEGFLYPCQHCERRFTTKQGLERHMHIHVSTASHSFKCRYCGKAFGTQINRRRHE
RRHEARPKKKLGALCSPPLPIESSSPDLVAPSGNFIIMGSQNRGDLQDSFESDKQSPAEV
ERAVDLNENGDPRELHPCKYCKKVFGTHTNMRRHQRRIHERHLLPKGVRRKGTLLQETQQ
QQVPPQKELVNPSPPPVYVPSGDLEDEGDPDEEYMVNISSNISENLSLYIDGKILSTSSM
SNCEVIEVDPSSATLYSLDALIVTSDNVSQGFQVEATNCTVKEVPKAGQPAIKRRTTSPP
LLTKIKSEVDPEPIMPSSSSSSSSSSSSSSLMVQLYPQATDSLAFQKEKTVYLSPKLKQL
LQTQESHKPGLFTEGHRLGPPLMSVTTLPSGSGRFKRRTASPPNSPQHSPVLRVDTGKPG
TEVGPPFPLKVPKLESHCSSPAWSLSSRDERDTVSPLGVDSYKTSPVDWLTGRSAGSSCN
QQPLDLSNGVKQKTECKSKGQAVVEAVLDLSMHRKTSPEGEPKRIGGPQHLIKKKKPNTC
MLQKVLMNEYGGLDSATETAEEIHNTEGSPNHHPDADLVMDASPAPLSPLHNALSPDTAV
ASALHPPPPSLTPVTMHPLSPTPTLTAPTPPLPVLPTAPSPLPDMFPASLSSSSSPSSPL
PVLSPKASPNPVDTSPLESSSAPLLDPSPFLLDASVVCSIALLDSLPDQVNPLDPDPTSL
QVDTTLASEDPSAGPVDPAHLTAVSPLQKKADTLSLTTDSSPSSADPTSNPLNVSTDLLC
SVSAPQLPLQCPVDPVPALGPSPTPIPQEPAEHLLIPTTMIKQEEQQQQAPLRSSPLHSP
DLPVLVASVPVPSPNSSPAPTLPPPLISEIVPLPPLPPDSITIKKKCGDIEQPADVSLTS
ALTPTPPVSSLQEAPYTEESPKQQTFCKSFVCNVCKAPYPSIKELSRHITVHSEEWPFRC
EFCVQLFRDANILLEHRSTLHGVGRIYVCSLCSKEFAFLCNLQQHQRDQHPDKDCTHIEL
ESGKLRPQNYTDPSRASLEPPITPAGDCDASAQGATSPQTRLSFENRKVKEEEDEEEPND
SSEELYTTIKIMASGESKPKGPDVRLGINQHYPSFKPPPFPYHNRTPAGSVASATNFTTH
NIPQTFSTAIRCTKCGNSFDNMPELHKHILACASASDKKRYTPKKNPVPLKQIVKPQNGV
FSVAAAGGNGSGQNAFRRMGQPKRLNFSQEPSNKMKLSALNKKKNQLVQKAIYQKNKSAA
TAKKASSLAQEEPETHVCPHCSREFTYVGSLNKHVAVSCPRKPASSKKAKKGSSSSGGGH
SFQDKNGNLRRRTADSEIKLQGSQAKLGKTRARSSGPVGNMASPSKTQPSKHKTTAPQIR
QKRPSSFHSSSVPYSKKSKTSPKSSPQQHPSLPAALGNGSEKLVMRMQKKVTEAKAQQQP
QQQLQLKKEERFSVKMRERSGGPVTRSLQLASSTAPSDVKGEDVNANQESRETQEPLLKM
SR
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatcccaagagggtcttaaggaagagaatgggaaaccttcaatctcgtccgta
ctgtcacaggagcaaactgccatcattcaggaactggtgagtcaggagcaactgcctttg
gcagtgagcgggtctccatctagcatttctgaagatctgtctcaggaagaagtggacgaa
gaagaggaagaggaaaaacaggtggagatacctgtagagaagggccagcccccacctgaa
ccggaagtgatggaatctgatgaagagccagcacccatcccaagccctcaggaggacatg
gagcaggatgagcagctgcagcaggaccctgtctccagttcaccaaagccccagggagac
ccaagtagtgagcttcaggaaggtttcctgtacccctgtcagcactgtgagcgtcgcttt
accaccaagcaggggctggagcgtcatatgcacatccatgtctccacagccagccactct
ttcaagtgtcgctattgtgggaaggccttcggcactcagatcaaccgccggcgccacgag
cggagacacgaggccagacccaagaagaaactaggggcactctgcagccccccactgcca
atagaaagctcgagtccagatctcgtcgccccttctggaaatttcatcataatgggctcc
cagaacagaggggaccttcaggattcatttgagtctgacaaacagagcccagcagaggtg
gagagggcagtagacctaaatgaaaatggagaccccagggagctgcatccatgcaagtat
tgcaagaaagtgtttggcacccacaccaatatgcgacggcaccagcgcaggattcacgaa
cgccacctactcccaaagggagtccggcggaaaggaacgctgttgcaggaaactcaacag
cagcaagtacctccacaaaaagaactggtgaaccccagtcctcccccagtctatgtgcca
agtggggacttggaagacgagggggatccggatgaggagtatatggtgaacatctccagc
aatatttcggagaacctcagcctctacattgatgggaagatcctatcaaccagcagcatg
agcaactgtgaagtcatcgaggtagaccccagctctgccactttgtacagcctagatgct
ttgatcgttacctctgataatgtgtcacagggctttcaagtggaggccaccaactgcact
gtgaaggaggttcccaaagcaggccaaccagcaataaagaggcgaaccaccagtccacct
ctgcttacaaaaattaaatcagaagtggatcctgaacccataatgccttcctcctcctcc
tcctcatcttcatcatcctcatcttcttctctgatggtacagctctacccacaggccact
gacagtttagccttccagaaggagaaaacagtttacctgtccccaaaactcaagcagctc
ttgcagacccaagagagtcacaagccaggtttgttcactgagggacatagacttggaccg
cccttaatgtcggttaccactttgccatctggctcagggaggttcaagagaaggacggct
tcccctccaaactctccacagcacagcccagtgcttcgagttgacacagggaagcctgga
acagaggttggacctccgttccccctcaaggtgccaaagctggagagccactgcagctca
ccggcctggagcctgtcaagtcgagatgaaagggacaccgttagcccactcggtgtggac
tcttacaaaacctcacctgtcgactggctgactgggagaagtgcaggaagctcctgcaac
cagcagcccttagacctttccaacggggtcaagcagaaaactgagtgcaaatccaaggga
caggctgtcgttgaagctgtactggacctcagcatgcacaggaagacctcccctgaggga
gaaccaaagagaatcggaggcccccagcatctaatcaaaaagaagaaacctaacacctgc
atgcttcagaaagtgttaatgaatgagtacggaggattagacagtgcaacggagactgca
gaagagatacacaatacagaaggcagccccaatcatcatcctgatgctgatttagttatg
gatgcctctcccgctcccctttcaccactccacaatgcactttccccagacacagctgtt
gcatctgcacttcatcctcccccaccctcgctaactcctgtgaccatgcatccactatcc
cctactccaaccttgactgcccccaccccacctctgccagttctgcccactgccccgtca
cccctcccagacatgtttcccgcttcattgtcctcctcctcatctccttcatcccctctt
ccagttttgtcccccaaagcctcgcctaatccagttgatacatctccgttggaatcctca
tccgctccacttttggatccctccccctttctactggatgcctctgtggtttgcagcatc
gctctccttgattccctaccagatcaagttaatcctttagatcccgatcccacatctctc
caagtggataccacccttgcttctgaagatccctcagcaggcccagtggatcctgcacat
ctcactgctgtgagtcccttgcagaaaaaggctgatacattgtctttaactacggattct
tcaccaagctcagctgatcccactagtaaccccctgaatgtctcaactgacttgctatgt
tccgtgtcagctccccagctaccattacagtgccctgtggatccagttccggctttgggt
ccatcccctactcccatcccacaggaacctgcagaacaccttctaattcccaccaccatg
atcaagcaagaggaacaacaacagcaggcaccactccgttcttcccctctacactcacca
gacctgcctgttcttgtggcttcggtcccagtccccagtcccaactcctctcctgctcca
actctgcctccccccttgatctcagagatcgtacctttaccaccactcccaccagactca
attacaataaaaaaaaaatgtggagacattgagcaaccagctgatgtctcgcttacctct
gctctcactcccacacctcctgtttcttctctgcaggaggccccttatactgaggaatcc
cccaagcagcagacgttttgcaagagctttgtgtgcaatgtttgtaaggccccctacccc
tccattaaggagctgagccgccacatcacggtgcactctgaagagtggcccttcaggtgt
gagttctgtgtgcagctcttcagggacgcaaacatcctgctggagcaccgctccaccctg
cacggtgtaggcaggatctatgtttgctccttgtgcagcaaggagtttgccttcctctgc
aacctccagcagcaccagagggaccagcaccctgacaaggactgcacacacatagagctg
gagagtggcaaactcaggccacagaactacactgacccgagtcgagccagtctggaacca
cccatcactcctgctggagactgtgatgcctctgctcaaggagccacttctcctcagaca
cgtcttagttttgagaataggaaggtgaaggaggaggaggatgaggaggaacctaatgac
tccagtgaggagctctacactacaatcaagatcatggcatctggagagagcaagcccaag
gggccggatgtgcggctgggtatcaaccaacactaccctagtttcaagccacccccattt
ccttaccacaaccggacgccagctgggtctgtagcctcggctaccaatttcactacccac
aatatcccgcagacctttagcacggctatccgctgcacaaagtgtggcaacagctttgat
aacatgcccgagctacacaagcacatcctagcctgtgcctcggccagtgacaaaaaacgt
tacacccccaagaagaaccctgtccccctcaaacagatcgtcaagccacaaaacggggtg
ttttctgtggcggcggctggaggtaatggttctggtcagaatgctttccggaggatgggc
caacccaaaaggcttaacttcagccaggagccgtccaacaagatgaagctgagcgccctt
aacaagaaaaagaaccagttggttcaaaaggccatctaccagaagaacaaatctgctgcc
actgcaaaaaaggcctccagccttgcccaggaggagccagaaactcatgtctgcccgcac
tgcagccgggagttcacctatgttggaagcctaaataagcatgtggctgtgagctgccct
cggaaacctgcttcttcaaaaaaagcaaagaaaggtagcagcagcagtgggggtggccac
tctttccaagataagaacggtaacctccgcagacgaactgctgactcggagattaaactg
cagggctcgcaagccaagctaggcaaaaccagggcccgcagttcaggaccggtaggcaac
atggcctccccttcgaaaacacaacccagcaaacacaaaacgactgccccacagatccga
cagaagcggccatcttctttccattctagttcagtcccctacagtaagaaaagcaaaaca
tcacccaagagcagcccccagcagcatccgtctctacctgcagccctgggcaatggatct
gagaaactggtcatgagaatgcaaaaaaaggtgaccgaagccaaagcacagcagcagcca
cagcaacagttacagctgaagaaagaagagcgattttctgtgaagatgcgagaaaggagc
ggcgggccggtcacccgcagtttacagctggccagcagcacagcaccgagcgatgtcaag
ggggaagacgtcaatgcaaaccaggaatctagagagactcaggaacctctattaaagatg
tcacggtag
DBGET
integrated database retrieval system
