Polyodon spathula (Mississippi paddlefish): 121328565
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Entry
121328565 CDS
T07273
Name
(RefSeq) rho guanine nucleotide exchange factor 16-like
KO
K20688
Rho guanine nucleotide exchange factor 16
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121328565
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121328565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
PH
SH3_9
SOS1_NGEF_PH
SH3_2
RHG20_PH
RepB_C
Motif
Other DBs
NCBI-GeneID:
121328565
NCBI-ProteinID:
XP_041129253
LinkDB
All DBs
Position
16:complement(10507033..10520070)
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AA seq
709 aa
AA seq
DB search
MSQRHSVGSVGDQAPLLLAGQFASDLQLDASLSEPSAAGPSREKHRSLGHLPKEDLSLPK
LSTSPENEPKKIILSTQSEASRRRGTQQLIPKGLAVASRPKQRYHTTGVSMPMWEAISQQ
EKRASVPAVSWEDYDADDFEEDGGGMLSRNRRNQSYRAAVKGFHNGAPEPVKTGASLKPV
QEERAPSPRSPSRSKKSLGRKRNAKHGGSFKDEPRLYQEIRERGLHSSNQDPDDDFVHVE
QLGPDEGIVVKNYRPTQLTWSQLPEVQERGILDRISPEERKRQEAIFEIILSEHSYQHSL
NVLVRLFKTSKELRKTMNITEHHHLFSNISDILEVSKSFFADLEKRHGEDPLIRDISDIV
ENHSSTHFKPYIIYCSNEVYQQRTLQKLLASNTAFKEALKHIEMTADCGGLSMISFLILP
MQRVTRLPLLMDTICQKTSTDLEEYHSAVKALKSISKLVKQCNDGARRMERTEQMYTIQK
QMEFGKIKPFPLVSASRWLQKRGELAVCTEELSIFWKAFTNKSYYLFLFNDVLIVTRKKS
EESYLVMDYATLEQIEVQLLESSEGQLASGSPRSSSSPNPNMFKVLMKRNSEGKEEQIAL
VAESPSDRARWVIALQHHKHTDNDDLNKEDLPQVEIIKGYRAKQPDELSLQQADVVLVLH
KVEGWFQGERLRDGERGWFPSSCATEITNRIAVERNVRRMERLRKETDV
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcggcactctgtcggttcagtgggggaccaggctcccctcctgctggcggga
cagtttgcttctgacctgcagctggatgccagcctcagcgagccctcggctgccggccca
tccagagaaaagcaccgctccctggggcacctcccaaaggaggacttgtccctgcccaaa
ctctccacctctccggagaacgagcccaagaagatcatcctgagcacgcagagcgaggcg
tcccgaaggcggggcacccagcagctcattcccaaaggcctggcagtggccagcaggccc
aagcagaggtaccacaccacgggggtgagcatgcccatgtgggaggccatctcgcagcag
gagaagcgcgcctctgtgccggcggtgagctgggaggattacgacgcggatgattttgaa
gaggatggtggcggcatgctgagcaggaatcggaggaatcagtcttaccgagcagcggtc
aagggcttccacaacggggccccggagcctgtgaagacaggggcaagtctgaaacccgtc
caggaggagagagcccccagcccgcgcagccccagcagaagcaagaaatctctaggacgg
aagaggaatgctaagcatggtggctccttcaaagatgagccgcggctgtaccaggagatt
cgggagagggggctccactccagcaaccaggacccagacgacgactttgtgcacgtggag
cagctggggccggacgagggaatcgtggtcaagaactaccgacccacccagctaacctgg
agccagctgcccgaggtacaagaacgaggcatcctggatcggatctcgccagaggagcgg
aagcgacaggaggccatcttcgagatcatcctgtccgaacactcgtaccagcacagcctg
aacgtcctggtgcgcctcttcaagacgtccaaggagctgaggaagaccatgaacatcacg
gagcaccaccatctcttctccaacatctccgacatcctggaggtcagcaagagcttcttc
gccgacttggagaaaagacacggggaggacccgctgatcagagacatcagcgacatcgtg
gagaaccactcctccacccacttcaaaccctacataatctactgctccaatgaggtttac
cagcagaggacactgcagaaactactggcgagcaacacggctttcaaggaggctctgaag
cacatcgagatgacggcggattgcggggggctgtccatgatctccttcctcattctgccc
atgcagagagtgacccgtctgcctctgcttatggatacgatctgccagaaaaccagcaca
gaccttgaagaataccactctgcagtgaaggctttgaaatccatcagcaagctggtgaag
cagtgtaacgatggagctcgcagaatggagaggaccgaacagatgtacactatacagaag
cagatggaatttggcaagattaagcccttccccctggtgtctgcatcgcggtggctgcag
aagcgtggcgagctggcggtctgcacagaggagctcagcatcttctggaaggctttcacc
aacaagagctactacctgttcctcttcaacgacgtgctcatcgtcaccagaaagaaaagt
gaggagagctatctggtgatggactacgccactttggagcaaatagaggtgcagctccta
gagagcagcgagggtcagctggcgagtggttcaccgcgcagcagctccagccccaacccc
aacatgttcaaggtgttgatgaagaggaacagcgagggcaaggaggagcagattgctctg
gtcgcagagtctccgagcgaccgagctcgctgggtcattgccctccagcaccacaaacac
acagacaacgacgacttaaacaaagaagatcttccgcaggtggagataataaagggctac
agggccaagcagccagacgagctgagcttgcaacaggctgacgtggtcctggttttgcac
aaagtggaaggctggttccagggggagaggctgcgggacggggagaggggctggttccct
tcgtcctgcgccaccgagataacgaaccgcatcgccgtggagcgcaacgtgcggcgcatg
gagagactgcgcaaggagacagacgtgtga
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