Polyodon spathula (Mississippi paddlefish): 121328575
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Entry
121328575 CDS
T07273
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121328575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121328575
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121328575
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
LPD13
Motif
Other DBs
NCBI-GeneID:
121328575
NCBI-ProteinID:
XP_041129275
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All DBs
Position
16:10315235..10316960
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AA seq
158 aa
AA seq
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MAPINVCNLALSAKDKLKMRKPVVEKMRRDRINVSIEQLKKLLESEFKAHHPSSKLEKAD
ILEMAVGYLRQNSQPASFKIATPQHSYSDGFYQCLEETLRFLSFQDPTKESQFKVLKHFQ
NTQAGGRDPLSSAAALGSQHDLLKGSSQGDGKVLWRPW
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atggctccgatcaacgtgtgcaacctagctctaagcgctaaagacaaactcaaaatgaga
aaaccagtggtggaaaaaatgcgcagggaccgtattaacgtcagcatcgagcagctgaag
aaactgctggagagcgagttcaaggcgcaccaccccagctccaagctggagaaagccgac
atcttagaaatggccgtgggttacctgcgacagaacagccagccggcctccttcaagata
gcaaccccgcagcacagctacagcgacggcttctaccagtgcttggaggagacgctgcgc
ttcctgtccttccaagacccgacgaaggaatcccagttcaaagttctgaagcacttccag
aacacgcaggcgggcgggcgggatccgctcagctctgcagctgcactgggctcccagcac
gaccttctcaaaggctcttcccagggcgacggcaaggtgctgtggagaccctggtaa
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