Polyodon spathula (Mississippi paddlefish): 121328584
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Entry
121328584 CDS
T07273
Name
(RefSeq) rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta-like isoform X1
KO
K13756
rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta [EC:
3.1.4.35
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00230
Purine metabolism
pspa01100
Metabolic pathways
pspa04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
121328584
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
121328584
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.35 3',5'-cyclic-GMP phosphodiesterase
121328584
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Motif
Pfam:
PDEase_I
GAF
GAF_2
DUF6115
DUF7698
Motif
Other DBs
NCBI-GeneID:
121328584
NCBI-ProteinID:
XP_041129304
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Position
2:94947083..94964232
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AA seq
856 aa
AA seq
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MSISKEDVEKFLDENLSFAQQYFDKKLRPEAISNVLGRAEPLVDFASFRELSQVEESEIL
FELIRDMQESINMEKVVFKTLKRISFLIHADRCSLFMYRQRNGIAELATRLFNVNNDANL
DDCLVQPDSEIVFPLDMGVVGNVAQTKKTVNIKDVKESSHFSSFVDTLTNYETKSILATP
IMNGKDIVAVIMAVNKIEGSGFSQEDEDLFLKYLNFASLNLKIYHLSYLHNCETRKGQVL
LWSANKVFEELTDIERQFHKALYTVRAYLNCDRYSVGLLDMTKEKEFFDLWPILMGEVPP
YSGPQTPDGREIIFYKVIDYILHGKEDIKVIPNPTPDHWALASGLPTYVAESGFICNLMN
APSEDMFKFQSEPLDDSGWTIKNVLSLPIVNKKEEIVGVATFYNRKDGKPFDEQDETLME
SLTQFLGWSVLNTDTYDKMNRLENRKDIAQDMVLYHVKCRNDEIQNILKTREVYGKEPSE
CEEDELASILKKELPGPTKFEIYEFHFSDFDCTELDLVKCGIQMYYEVGVVKKFQIPQEV
LVRFMYSVSKGYRKITYHNWRHGFNVGQTMFTLLTTGKLKRYYTDLEVMAMITAGFLHDI
DHRGTNNLYQMKSQNPLAKLHGSSILERHHLEFGKFLLSEESLNIYQNLNRRQMDHVIHL
MDIAIIATDLALYFKKRTMFQKIVDLSKTYEDDNKWVEFLSLETTRKEIVMAMMMTACDL
SAITKPWEVQSKVALSVAAEFWEQGDLERTVLDQQPIPMMDRNKAAELPKLQCGFIDFVC
TFVYKEFSRFHEAILPMYDGLLNNRKEWKALAEVYDEKMKAIEEEKKKKEEAEAAKAQAA
AGGGGGGTQSKTCSIC
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcagcaaggaagatgtggagaagttccttgatgaaaacctgtcttttgcccag
cagtactttgacaaaaagctcagacctgaggctatttccaatgtcctaggcagggctgag
cccctggtggattttgcatctttcagggaactcagtcaggtggaggagagcgagattctg
tttgaactcattcgagacatgcaggaaagcatcaatatggagaaagttgtcttcaagacg
ctgaagagaatcagcttcctcatccatgcagacagatgcagtctctttatgtaccgccaa
aggaatggcatagctgagctggccaccaggctctttaatgtcaataatgatgcaaatttg
gacgattgtctggtccagccagattcagaaattgtcttccctctggatatgggcgtagta
ggaaacgttgcccaaaccaagaaaaccgtaaacatcaaagatgtcaaagagtccagccac
ttcagctcttttgtggataccctcacaaactatgaaacaaaaagcatactggctactccc
atcatgaacggcaaagacattgtagcagtaatcatggctgtgaacaagatagagggttct
ggcttctctcaggaggatgaagatctttttctgaagtatttaaattttgcctcattaaac
ctcaaaatctaccacctgagttacctgcacaactgtgagacacgtaaaggacaggtcctg
ttgtggtctgctaacaaggtatttgaagagttgacagatattgagagacagtttcacaaa
gccttgtacacagtgagggcatacctaaactgtgacagatactcagtagggctgctggac
atgacaaaggaaaaggaattctttgacctgtggcctatcctaatgggtgaagttccacca
tactccggacctcagacaccagatgggagggaaatcatcttctacaaagtaattgactat
attctccatggaaaagaggacattaaagttattccgaatcctacaccagatcactgggca
cttgctagcggactacctacatatgttgcagaaagtggttttatctgtaaccttatgaac
gcaccttcagaagatatgtttaaatttcagagtgaaccgctagatgacagtggttggaca
atcaagaatgtcctgtctttgcccatcgtgaacaagaaagaagaaattgttggtgtggcc
actttctacaacaggaaagatggcaagccatttgatgaacaggatgaaacactcatggag
tctcttactcagttcctcggctggtcagtactcaacacagacacttacgacaagatgaac
aggctggagaatcgtaaagacattgctcaagacatggtgctctaccatgtgaaatgccgc
aatgatgaaatccaaaatattttgaaaacaagagaggtctatggaaaagagccttcagaa
tgtgaggaggatgaacttgccagcatcctgaaaaaggaacttcccggacctaccaaattt
gagatttacgagtttcacttctcagactttgactgcacagaactggacttggtcaagtgt
ggtatccagatgtactacgaggtcggggtggtgaaaaagtttcaaattcctcaagaggtg
ttggtgaggtttatgtactcagtgagtaaaggttacaggaagatcacctaccacaactgg
cgccatggtttcaatgttggacaaaccatgttcactttactaacaactgggaagctgaag
cggtattacacagatttggaggttatggctatgattacagctggtttcttgcatgatatc
gatcacagaggaactaacaacctgtaccagatgaaatctcaaaacccactggcaaaactt
cacgggtcatcaatactagagcggcaccatttggaatttggcaaatttttgctttcagaa
gagagtttaaacatttaccaaaacctgaataggaggcagatggaccatgtgattcatctc
atggatattgccattattgcaactgacttggcactttacttcaaaaaacgaacaatgttc
cagaagattgtagatttgtccaaaacatatgaagatgacaacaaatgggtcgagttcctg
tcattggagaccaccaggaaagagattgtaatggccatgatgatgacagcatgcgactta
tctgctattacaaaaccttgggaggtccagagtaaggtcgcgctttcagtagcagcagaa
ttctgggaacagggtgacttggaaagaactgttttagatcagcagcccattcctatgatg
gatagaaacaaggcagcagaactcccaaagctacagtgtggtttcatcgactttgtctgc
acgtttgtgtataaggagttctcccgtttccacgaggcaattctgcctatgtatgatggc
ctgctgaacaacagaaaagagtggaaagcactggctgaggtttacgatgagaaaatgaag
gccattgaagaagagaagaaaaagaaagaagaggccgaggcagcaaaagcacaagctgcg
gcaggaggtggtgggggaggaacacagtcaaagacctgctcaatatgctaa
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