Polyodon spathula (Mississippi paddlefish): 121328592
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Entry
121328592 CDS
T07273
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 3-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121328592
03012 Translation factors [BR:
pspa03012
]
121328592
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121328592
mRNA cycle factors
Stress granule specific factors
121328592
Translation factors [BR:
pspa03012
]
Eukaryotic type
Initiation factors
eIF-4
121328592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
PP_kinase
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
121328592
NCBI-ProteinID:
XP_041129319
LinkDB
All DBs
Position
16:15962059..16026548
Genome browser
AA seq
1743 aa
AA seq
DB search
MSLPPRAVQKSAAAAGSGPGTGLSPPSQLRVLPTSVPVPGAPAAPQQPAAPPPQVFLNVS
RFRIPRGQQTLEDRIFPTQATVAAVFGVPRQPAPPYASHELNKGHPSLAATPSGHSSTPG
LSQVSVSTAHLYRCIKGWESVGGSPYTSGQNAAAAPPVYLPQQPMNAQPQSRSFAAGPRP
AHHQGGFRPIQFFQRSQMQTARATIPSNSPSIRPGSQNPAPAVYPPNQPIMMTMTAMPFP
SPQGTQYYIPQYRHSTPYVGPPQQYSVQPPGPNTFYPGPGPGEFPTPYGAPYYTGQTVYS
PSPPIIVPTPQQPPPAKREKKTIRIRDPNQGGKDITEEIMSGGGGSRNTTPPVGRPSSTP
TPPQFLCPHPHYPHIFYLKSQQLSSQAPDHGHVMYSVENQLTPTAVDFKPEEKPKHDPAV
LKSSSPGLRPDLTAEKRDHSVTTQDLSPPEKPPELPLVIPAAVATPSSSSSLAAIPIAVT
SKPALTVDRDESGSLREEPAPSVSPQPSHKALPDPPRSLSASPAIPTSAGVAAVMKEMNG
LSEKEATSQCSDVDMASQEPVLLLLQTPPPPLTANAESQETHLREARAASPSLPAHPAST
CSAILTSTASAALIVAATPLPILQLVNQGTVEAGEGRRTPISSETKEVGDVDIQLEETLD
SQPPNSRKSPILAQTAPAAPKTWKKPKEGTGGQDEVLDTDREPEPREEGSVEQALEAEPH
CPSPVPVEMKQQPVPEENGERELEPVRNGAEHISESESTDSGATTGDKDSSTGTPQCIFQ
EASLDSDGKKQYDREFLLGFQFMAACVQKPEGLPQINDVVLDKINQNKLPMRPLDPRVMA
RGPDFTPAFADFSRQITGGRGAALLSAGLRRSQQGQRREPRKIITNVSVNEVQLRKAENA
WKPTLKRDEEPGENKTQDLFRKVRSILNKLTPQMFNQLMKQVTDLTIDTEERLKGVIDLV
FEKAVDEPSFSVAYGNMCRCLATLKVTMTDKPNSTVNFRKLLLNRCQKEFERDKVDDDVF
ERKQKELEAAASSSERERLQEELKEAKDKARRRSIGNIKFIGELFKLKMLTEAIMHDCVV
KLLKNHDEESLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQD
VIDLRLHNWVSRRVDQGPKTIEQIHKEAKIEEQEEQRKVHQQLLSKDKRRPVLQREETWN
TVPMSKNSRTIDPSKIPKISKPTIDDKIQLGPRAQMSWGKGSSGGAKASESDASRSSTTN
LNRFSALQSCAQPAVLSPPTTPASEFDSRRSLTSRSSTGRERNDKPVSTGLSRPATFTQG
SSNKELLDNQVQEEQPREALETVTQLPTGAEEKSGAYNAAKPDAPAALAADKPAITEEEM
ERKSKSIIDEFLHINDYKEAVQCVEELCVPSMLHVFVRVGVESTLERSQITRDHMGQLLF
QLVQSGSLSTQEFFKGFAEILEFADDMAIDVPHIWLYLAELVIPMFREGGISMRELLSEF
SKPLLPVGRAGVLLSEILHQLCKQMSQRKVGALWRESGLKWIDFLPEEEDVHSFITDQKL
QFTVSGCSNPTEALSKRDLSPDELSRQLEKLLLEDIVSDEQIFDWVEANLEESQMSSTPF
LRALMTAVCKAAVKGESTPSRVDTAIIQRRLPVLLKYLNSDTEKQLQALYALQALIVKLD
QPPNLLRMFFDCLYDEDVISEDAFYKWEVSKDPAELEGKGVALKSVTAFFTWLREAEEES
EDN
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccgccgagagcggtacagaaatcagctgctgccgctggaagtggacccgga
accgggctgtctccgccgagccagctgcgggttcttccgacctctgtgccggtaccggga
gcaccggccgccccacagcagccagccgcgccgccgccgcaagttttccttaatgtgtcg
cgcttcaggatccccagaggtcagcaaacacttgaagatcggatcttccctacgcaggcc
acagtagctgctgtgttcggtgtacccaggcagcctgcacctccctacgcatcacacgaa
ctcaacaagggacaccctagtctagcggccaccccctcaggccactcatccactccagga
ctctctcaggtatcagtatccacagcacacctatatcgctgcattaagggctgggagtca
gtcggagggtctccgtacacctctggacagaatgcagcagccgcaccgcctgtgtacctt
ccccagcagccaatgaatgcacaaccacagagccgctcgtttgcagcggggcctcgtcct
gcccaccatcagggaggattcaggcccatccagtttttccagaggtcccagatgcaaacg
gcacgcgcaaccattcccagtaacagtccatcaattcgcccaggatcacagaaccctgcc
cctgctgtgtaccccccaaaccagccaatcatgatgaccatgactgccatgcccttccca
tctccacaaggaactcagtactacataccacagtaccgccacagcactccctatgtgggc
cctcctcagcagtattccgttcagccaccggggcccaacaccttctatcctgggcctgga
cctggggagttccccacgccgtacggagcaccctactacactggacagactgtgtacagt
ccctctccacccatcatagtgcctacaccacagcaacctccgcccgccaagagagagaag
aaaacgatccgaatccgagaccccaaccagggcgggaaggacatcacagaggagatcatg
tcgggagggggtggaagccggaacacaaccccacccgtaggcaggccgtcctccacaccc
acccctccccagtttttatgtccgcaccctcattatcctcacattttctacctcaaatcc
cagcagctgagcagccaggccccggatcatgggcacgtgatgtacagtgtggagaaccag
cttacccccacagccgttgacttcaagccagaagagaagccaaaacacgaccctgctgtg
ttaaagtcctcgtcgccggggctgcggcctgacctcactgctgagaagagggatcacagt
gtgaccacgcaggacctttctcctccggagaaacctccagagcttcccctggtcatccct
gctgctgttgccacacccagctcttcctctagccttgccgccattcctattgctgtcacc
agcaaaccggcactcacagtggacagagacgaatcaggcagcctcagagaggaaccagct
ccctcagtctccccacagccctcccacaaggccctcccagatccacccaggagtctctct
gcttcccctgccatccccacgtcagctggagtggccgctgtcatgaaagagatgaacggg
ctgagtgaaaaggaggcaacctcacagtgcagcgacgtggacatggcctcccaagagcca
gtgctgctgctgcttcagactcctcctccgcccttgactgccaacgctgagagtcaggaa
actcatttgagagaggccagggcagcgagcccaagtctgccggcccaccctgccagcact
tgttccgctatcctaacctccactgctagtgctgctctcattgttgctgctacccctctt
cccatactccagctagtcaatcaggggactgtcgaggctggggaaggtaggaggacgccc
atcagctcagagacaaaagaagtgggagacgtggacatccagctggaggaaaccctagac
tcccagccacccaactccagaaaaagtcctattctagctcaaactgctcctgctgcacca
aagacctggaagaaaccaaaagaggggactggagggcaggatgaagtgctagacacagac
agagagcctgagcccagggaggagggttctgtagagcaggccctggaggctgagccccat
tgccccagccctgtccctgtggagatgaagcagcagcccgtccccgaggagaacggagag
cgggagctggagcctgtgagaaacggagcagagcacatctcagagagcgagagcacggac
agtggagccaccacaggggacaaggacagctccactgggactcctcaatgcatcttccag
gaagcgtctctggactctgatgggaagaagcagtatgaccgggagttcctgctaggcttc
cagttcatggcggcctgcgtgcagaaaccagaggggctgccccagatcaacgatgttgtt
ctcgacaagataaatcaaaacaagctgccgatgaggcccctggaccccagagtgatggcc
cgtggccccgacttcactcccgccttcgcagacttcagccggcagatcacaggagggcga
ggggctgctttgctgagtgcgggtctgcggcggtctcagcagggccagcggcgagagcca
cgcaagatcatcaccaacgtgtctgtgaacgaggtgcaactgaggaaagctgagaacgcc
tggaaacccaccctgaaaagagacgaggagcctggcgaaaacaaaacacaggacctgttc
cggaaggtgcgtagcatcctgaacaagctgaccccgcagatgttcaaccagctgatgaag
caggtgaccgatctgaccatcgacacagaggagcggctcaagggggtcatcgacctggtg
ttcgagaaggcagtcgatgagcccagcttctccgtcgcctacggcaacatgtgccgctgc
ctcgccacactcaaggtgaccatgactgataaaccgaacagcactgtgaatttccggaag
ctgctattgaaccgctgccagaaagagtttgagagggacaaggtagacgatgatgtgttc
gaaagaaagcagaaggagctggaagctgcagcctcgtccagcgagcgggagcgactccag
gaggagctgaaggaggcgaaggacaaagcgcggcggcgctccatcggcaacatcaagttc
atcggggagctcttcaaactcaagatgctgactgaggccatcatgcacgactgcgtggtc
aagctgctgaagaaccacgacgaggagtctctggagtgcctgtgccggctgctcaccacc
atcggcaaggacctggacttcgagaaggccaagcctcgcatggatcaatacttcaaccag
atggagaagattgtgaaggagcgaaaaacatcgtcccgaatccgcttcatgttacaggac
gtcatcgacctcaggctgcataactgggtttcacggagagtggaccagggccccaaaacc
atcgagcagatccacaaggaggcaaagattgaggagcaggaggagcagaggaaagtgcac
cagcagctgctgtccaaggacaagaggagaccagtcctgcagagagaggagacctggaac
actgtacctatgtctaagaacagcaggacgatagaccccagcaagattcctaagatctcc
aagccaacaatagatgataagatccagctggggcccagagcacagatgagctgggggaaa
ggcagcagcggaggagctaaagccagtgaatcagatgcctctcgctcgagcactactaat
ttgaaccggttctctgcactacaatcttgtgcacagcctgctgttctctctcctccaaca
acaccggcatcagagtttgattcccgcaggagtctcaccagccggagcagcacaggacgc
gagaggaacgacaagcctgtgagcacaggcctctcccggcccgccaccttcacccagggc
agcagcaacaaggagctgctggacaatcaggtgcaggaggagcagccgagagaggccctc
gagacggtcacgcagctgcccaccggcgccgaagagaagagcggtgcttacaacgccgca
aagcctgatgctccagcagcccttgctgcagacaagcctgccattactgaggaggaaatg
gagaggaaatccaaatccatcattgacgagttcctgcacattaacgattataaggaggca
gtgcagtgcgtggaggagttgtgcgtgcccagcatgctccacgtgtttgtgcgggtgggt
gtggagtccacgctggagaggagtcagatcacgagggatcacatgggccagttactgttc
cagctggtgcagtcggggagcctctccacacaggagttctttaaagggtttgcagaaatc
ctagagtttgctgacgacatggcgatcgacgttccccatatatggctgtatctagcagag
ctggtgatccccatgttccgtgaaggaggaatctctatgagagagttattaagtgaattc
agtaaacctttacttcctgtgggaagagctggggtattgctttctgaaatattgcaccaa
ctatgcaaacaaatgagccagaggaaagtgggagccttgtggagggaatctggcctcaaa
tggatagacttcttaccggaggaagaggatgtgcacagctttatcactgaccagaaatta
cagttcactgtttcgggctgctccaaccccactgaggcactttcaaaaagagacctttct
cctgatgaactcagcagacagctagagaaactccttctggaagatatcgtcagcgatgag
caaatcttcgactgggtagaggctaatttagaagaatctcagatgagttcaactccattc
cttagagctttaatgacagcagtctgcaaagcagcagtgaaaggggagagcacccctagc
cgtgtggacacagccattatccagcggagattgcctgttttgctcaagtacctgaactcc
gatacagagaaacaattgcaagcactttatgcactacaagcattgatcgttaaactcgat
cagccgcctaatttgctccggatgttttttgactgcttgtatgatgaagacgtaatctcg
gaggatgcattctacaaatgggaagttagcaaggacccagccgagctggagggaaagggt
gtggctctgaaatcggtcacggcctttttcacatggctacgagaagcggaggaggaatcg
gaagacaattag
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integrated database retrieval system
