Polyodon spathula (Mississippi paddlefish): 121328609
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Entry
121328609 CDS
T07273
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00510
N-Glycan biosynthesis
pspa00513
Various types of N-glycan biosynthesis
pspa01100
Metabolic pathways
pspa04141
Protein processing in endoplasmic reticulum
Module
pspa_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
121328609
00513 Various types of N-glycan biosynthesis
121328609
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121328609
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Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
AIP3
Motif
Other DBs
NCBI-GeneID:
121328609
NCBI-ProteinID:
XP_041129379
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Position
16:37559914..37569817
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AA seq
600 aa
AA seq
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MSRSVLGPLFLVLLAGLCRAEQPDSSLLNEEVKRTVDLSSHLAKITADITVSNPGGSAAQ
SIVIALDPELQGHLAYIGVTVKGDEEEDSRLELQETTVRGKSGKFFRARFPSPLAGGAKL
KLSLETVYTHVLLPYPTHISQAEKQFVVFEGNHYFYSPYPTRTQSTRARLASKNVESYSK
LGNPSKSDEVIEYGPFKDIAPYSQDAMKIHYENNAPFLTITDITRTIEVSHWGNIAVEET
VDLRHTGAMLKGPFSRYDYQRQSDSGISSIKSFKTILPAAAQDVYYRDEIGNISTSHLLV
LDDSVEMEIRPRFPLFGGWKTHYMVGYNLPSYEYLYNLGDQYALKMRLVDHVFDDQVIDS
LTVRLILPEGARNIQVDSPYSIQRDPDDLHYTYLDTFGRPVVVAHKKNLVEQHIQDVVVH
YNFNKILMLQEPLLVVGAFYILFFTVIVYVRLDFSITKDPALEVRMKVASITEQVLTLVN
KRLGLYRHFDEVINKYKQSRDTGALNSGRKTLEAEHRTLTNEVASLQSCLKAEGSDLADK
VGEIQKLDVQVKELASRSCQEAERLVAGKVKKETYIESEKQLSAKRQDLVTRIDSLLDAL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgttccgtcctaggccccctctttctcgtcctgttggccgggctctgccgcgcc
gagcagcccgacagctccctcctgaacgaggaggtgaagcggaccgtcgacctgagctcg
cacctggccaaaatcaccgccgacatcaccgtgtccaacccgggcggctcggcggcccag
agcatcgttatcgcgctggatccagagcttcagggccacctggcttacatcggagtgact
gtgaagggagacgaggaggaggacagtcggcttgagctgcaggagaccacagtcaggggg
aagagtgggaagttcttccgcgcgcgcttcccctccccgctggcagggggcgccaagctg
aagctgtccctggagacggtgtacacccacgtcctgctgccctaccccacacacatcagc
caagcggagaagcagttcgtagtgtttgaggggaaccattacttctactcgccgtacccg
acccgcacccagagcacccgagcccgcctcgcctccaagaacgtggagagctacagcaag
ctgggcaaccccagcaagagcgacgaggtcatcgagtacgggcccttcaaggacatcgcc
ccctacagccaggatgctatgaagattcactatgagaacaacgcccccttcctgacgatc
acggacatcacgcggaccatcgaggtgtctcactggggcaacatcgccgtggaggagacg
gtggacctgcgccacacgggcgccatgctcaagggacctttctcacgttacgactaccag
cggcagtccgacagcggcatctcctccatcaagtcattcaagacgatcctgcctgcagct
gcccaggatgtttattaccgggatgagattggcaacatctccaccagccacctgctggtg
ctggacgactccgtggagatggagatccggcctcgcttccctctcttcggaggctggaag
acccactacatggttggctacaacctgcccagctacgagtacttgtacaacctgggtgac
cagtatgctctgaagatgaggctggtggaccatgtgttcgatgaccaggttatcgactcc
ctcaccgtcagactcatcctgcccgaaggagccaggaatatccaagtggactctccctac
tccatccagcgcgaccctgatgacctgcactacacctatctggacacgttcggccggccc
gtggtcgtggctcacaagaagaatctggtggagcagcacatccaagacgtggtggtccat
tacaacttcaataagatcctgatgctgcaggagcccctgctggtggttggtgctttttac
attctcttcttcacagtcattgtgtatgtgagactggacttctccatcaccaaggacccc
gctctggaggtgcgtatgaaggtggcctcgatcacggagcaggtccttaccctggtgaac
aagcggctgggcctgtaccgccacttcgacgaggtcatcaacaagtacaagcagtcccgc
gacacgggcgcactcaacagcggccgcaagaccctggaggcagagcatcgcaccctcacc
aacgaggtggcctcgctgcagtcatgcctcaaagcagagggctccgacctggccgacaag
gtgggtgagatccagaagctggatgtccaggtgaaggagcttgcgtcccggtcctgccag
gaggcagagaggctagtcgctgggaaggtgaagaaggagacgtacatcgagagcgagaaa
cagctgtctgccaagcgccaggacctggtgacccggatagacagcctgctggacgccttg
taa
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