Polyodon spathula (Mississippi paddlefish): 121328628
Help
Entry
121328628 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase MIB2-like isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121328628
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121328628
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121328628
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIB_HERC2
Ank_2
SH3_15
Ank
Ank_5
Ank_4
Ank_3
Ank_KRIT1
zf-C3HC4_3
ZZ
TerY_C
Motif
Other DBs
NCBI-GeneID:
121328628
NCBI-ProteinID:
XP_041129418
LinkDB
All DBs
Position
16:7113804..7162456
Genome browser
AA seq
946 aa
AA seq
DB search
MEVGMRVIRGVDWKWGNQDDGEGHVGTVVEIGRQGSTTTPDKTVVVQWDSGTRTNYRTGY
QGSFDLLLYDNAQIGVRHSNIICDSCKKHGIMGMRWKCKVCFDYDLCTQCYMNNKHDLSH
NFERYETAHSQPVTLTPRQNLSRIILKGIFQGVKVVRGPDWDWGNQDGGEGKVGKVMDIR
GWDTESGRSVASVTWTNGTTNVYRMGHKGKVDLKYISDIAGGYYYKDHLPKLGEHAELQR
QDSAEGHTFQQGDKVKCLLEVDILRQMQEGHGGWNPKMAEYIGRIGTVHRITDRGDARVQ
YSNNIRWTFHPGALTKVNTFGVGDLVRVMDDMENVKRLQAGHGEWTDSMAPALGQVGKVL
KVYADGDLRVALGAQTWTFNPACLSAQPVEGDANLMTADNTNDSGSTVISVLEKLLSQST
DQDNPGRLVIEAARGSASKVRDLLQKYPEKVDIKNQGKTSLQVAAHQGHMEVVKVLLQAN
ASIEIKDEDGDTALHYTAFGNQAEVARLLLSKGAGVNLLNTSMCTALHIAVNKGFTEVVR
VLSEHNANINLQDSYGDTPLHDAIAKDFRNIIEILTDVPNVDFTQQNNRGFNLLHHAALK
GNKLAMEKILARARQLADVKKDDGFSALHLAALNNHREVAEVLIKEGRCDVNVRNNRNQT
PLQLAVTQGHAEMVQLLVTEGADVNVEDEDGDTAVHIALSRQQLASTMAAMEGEGSSLYT
RLQGSGLLGNQELNVGAAIACFLAQEGADINYANHKGKSPLDLVTDGMIVQLIKNFSEKH
RLQQLQGNSSGPVVSSSLRRVHTTPNTMTNLAMPSAPGPSECLICSELALLLLFSPCQHS
VACEECALRMKKCIKCQVTITKKTRQDNTEVECSPSPENSEQSNLLEQLQSRYRQMEERI
TCPICIDNHIKLVFQCGHASCIDCSVALKTCPICRQTIRERIQIFV
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgggcatgcgtgtgatccgcggcgtggactggaagtggggtaaccaggatgat
ggggaggggcacgtcggcaccgtggtcgaaattggccgccagggcagcaccaccacaccg
gacaaaacagtggtggtgcagtgggacagcggcaccagaaccaattaccggaccggctac
cagggatcctttgacctgctcttgtatgacaacgcacagatcggtgtccgtcactccaac
atcatctgtgacagctgtaagaagcacgggatcatgggaatgcggtggaagtgtaaggtg
tgcttcgactacgacctgtgcacgcagtgctacatgaacaacaagcacgacctgtcccac
aacttcgagcgatacgagacggcgcattcgcaaccggtgaccctgactccacggcagaac
ctttcccgtatcattctcaaggggatttttcagggggtgaaagttgtacgaggaccagac
tgggactggggcaatcaggacggaggagaagggaaggttgggaaggtgatggatatccgt
ggctgggacaccgaatcaggacgcagcgtggccagtgtgacctggaccaacggaaccaca
aacgtctacaggatgggccacaaaggaaaggtcgacctgaaatacatctctgacattgca
gggggctattactacaaagatcacctccctaagctaggtgagcacgctgaacttcagcga
caggacagtgcggaaggccatacgttccagcagggagacaaggtgaagtgtctcctggag
gtggacattctgagacagatgcaggaaggacacgggggctggaatcccaaaatggcagag
tacattggccgcatagggactgtgcacaggatcacagaccgaggtgatgcgagagtccag
tacagcaataacatccgatggactttccaccccggtgccctaaccaaggtgaacacgttt
ggggttggggatctggtgcgcgtgatggatgatatggaaaacgtgaagcgtcttcaggct
ggccacggagagtggacagacagcatggcaccggctctggggcaggtggggaaggtgctg
aaggtgtacgcagatggagatttaagggtggccttgggggcacagacctggacctttaac
cctgcgtgtctctctgcgcagccagtagagggtgacgccaacctcatgactgccgataac
acgaacgactccggaagcactgtgatctctgttctggagaagctgctgtcccagtccact
gaccaggataaccctggacggctagttatcgaggctgctcgtgggagtgcaagcaaggtc
cgggatctgctgcagaaatacccagaaaaggttgatataaagaatcaggggaagacatct
ctgcaggtggcagcgcaccagggtcacatggaggtggtgaaggtgctgctgcaggccaat
gccagcattgaaatcaaagacgaggatggagacacggctctgcattacacagcgtttggg
aatcaggctgaggtcgcccggctactcctgagtaaaggagccggagtgaacctgctcaac
acttcaatgtgcacggctctgcacatcgccgtcaataagggcttcacagaggtggtgcgt
gtgctttcagaacacaacgctaacatcaacctgcaggattcctacggcgacactccgctt
cacgacgccattgctaaagacttcaggaacatcattgagatcctgaccgacgttcccaac
gtcgacttcacccagcagaacaacaggggctttaaccttcttcaccacgcggcgctgaag
gggaacaaactagccatggagaagatcctggcacgagcacgccagttagcggatgtcaaa
aaggatgatggcttctccgctctgcacctggctgctctaaacaaccacagagaggtggct
gaagtcctcatcaaagagggccgctgtgacgtcaacgtcaggaataaccgtaaccagacc
ccgctgcagctagctgtgacgcagggccacgccgagatggttcagctgctggtgactgaa
ggggctgacgtcaatgtggaagacgaggacggagacacggccgtgcacatcgctctgagc
cggcagcagctcgcatccaccatggccgccatggagggggagggctcctctctctacacc
aggctgcagggctcagggctgttggggaaccaggagctgaatgtgggcgctgctatcgcc
tgcttcctggcccaggagggagccgacataaactacgccaatcacaaaggaaagagcccg
ctggacctggtcacagacgggatgatagtgcagctcatcaaaaacttctctgagaagcac
aggttgcagcagctccaaggcaacagctcaggcccggtggtgagcagcagtctgcggaga
gtccacaccacccccaacaccatgaccaacctggccatgccctccgcccccggcccctct
gagtgcctcatctgctcagagctggccctgctgctcctcttctccccctgccagcacagc
gtggcttgcgaggaatgtgctctacgcatgaaaaaatgcatcaagtgccaggtcacgata
acaaagaaaaccagacaagacaacacagaggtggagtgcagccccagcccggagaactcg
gagcagagcaacctgctggagcagctgcagtctcgttacaggcagatggaggagcgtatc
acctgtcccatctgcatcgacaaccacatcaagctggtgttccaatgcggccacgcctcc
tgcatcgactgcagcgtcgcgctcaagacctgccccatctgccggcagaccatccgtgaa
cgcatccagatcttcgtctga
DBGET
integrated database retrieval system
