Polyodon spathula (Mississippi paddlefish): 121328645
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Entry
121328645 CDS
T07273
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19-like isoform X1
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121328645
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121328645
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121328645
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121328645
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121328645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
zf-MYND
CS
USP7_C2
ISP3_C
Motif
Other DBs
NCBI-GeneID:
121328645
NCBI-ProteinID:
XP_041129471
LinkDB
All DBs
Position
16:complement(26432736..26478578)
Genome browser
AA seq
1478 aa
AA seq
DB search
MASTAEAGGRRRRGLEDTSSEKKQKDKANQESKDAKRAASREARKELPHSQDLSEELSED
TDIDDVFFDWKQNSNEIIVKLRPGDGVAKVEDVDAAFTDTACQVRFPDGRQWSCNFFAEI
ESSCSKVQYKEKGNVLQLVLQKKIPFNPWPSMMDNKNKDPVILQTENGKKGSLKTEKMDE
KESAPVPSEPKEQKRPKDRGMKRAIKTKPSQVCEPGSKVTGTTKTAVKNTEAQAEPITKR
AVCTKDSKDPERDTPAKILGNGKNESAPEAGNSAHCNGRSKYKRSGRESLVEKTTECKPT
EAEMIEENVLSAVSQGPSSTQGSRKGESEMKEQLVGDVEPDMCRNDRGDSESEVGKGTPE
VQEAETVHLGAGEQSTPSKDSISTIEGESEKVDESKEDALEEQPEILEPMVNLTFVKNES
YEKGNDLVVVNVYLKEICRETVKVLFREQDFTIIFQTSDQNFLRFHSSCGPDTVFKWQVK
LRNLIHPEQCAYSFTPFRLDITLKKRHSQRWGGLEAPATQGHPKHTGLILTLAGEVGLEL
QKSSRAEGPRTKTSSSCAVGGAKVALSTGPATLEKTQPGSSQHTLPSKEEPRSAEKEKSR
TEDGVPIKQEPLVTSPKPTCMVPPMSHSPAGSEHLEEVEEKVMCLPGFTGLFNLGNTCFM
NSVIQSLSNTRELRDYFHDQAFKTELNCSNPLGTGGRLAIEFAGLLRSLWKGTHNAFQPS
NLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRPDEVVAE
EAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPFLYLPVPLPQKQKVLTIFYF
GKEPHKKPIKFLMSVSKENSSTSDVLESISKSVRVKPENLRLTEVIKSRFHRVFLPSHSL
DAVSPSDTLFCFEVLSKDLTKEKVLILQVQQRPQVPCISISKCAACQKPPQAEDKKVKRC
TRCYCVGYCNTACQRTHWPIHKNQCKPYVENIGCPFLISVPESRLTYSRLAQLLEGYSRY
SLNVFQPPIQSGKLSPEPSQCRADLPPQVPEIPDGCCKEGYLDETKEHEKVMQSLESDMC
QAAGDSKRDNDSTLTVDSGYSSQLHESQEQAGCEKETSCEKAVKPEAAVTGYQKPTESLA
SSASQFYISVINSAKNEEKLEDKGDVVLDIPEDSSLDLVWKNNERSKEYVLIESKELEYV
EDPGSASEAARAGHFTLEHCLNLFTRPEVLAPEEAWYCPKCKQHREASKQLMLWRLPNVL
IIQLKRFSFRSFIWRDKINDMVDFPVRSLDLSNFCNDQKDENQPPIYDLYGVINHYGGMI
GGHYTAYARLPSDKNSQRSDVGWRLFDDSTVTTVEESQVVTRYAYVLFYRRRNSPLERPS
RCPAPHNTESPAMAEAGASQASLIWQELEEEEEGEEGAQTGRIGQLRSRATPDSAALTGL
SDYSDEDYVRYFVLGTFAAVVALVINVFYPLISQGHWS
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaccgctgaggctggggggcgcagaagacgtggcctggaggacacttcaagc
gaaaagaagcagaaagacaaggcaaaccaggagagcaaagatgcaaagcgagctgccagc
agagaggcaagaaaagagctacctcactctcaggatttatcagaggaattaagtgaggat
acagatattgatgatgttttttttgattggaaacaaaactccaatgagataatcgtgaag
ctcagacctggagatggtgttgcaaaggtggaagacgtggatgctgcattcacagacaca
gcctgtcaggttcggtttccagatggacgccagtggagctgcaacttctttgcagagatt
gagagttcctgcagcaaagttcagtacaaagaaaaaggaaacgtgttgcagttggtttta
cagaagaagatccccttcaatccttggccctctatgatggacaacaagaataaagaccct
gtgattttacagacagaaaatggaaaaaagggttctttgaagactgaaaaaatggatgaa
aaagagagtgcccctgtgccatcagagccgaaggaacagaagaggcccaaagaccgagga
atgaaacgtgcaataaaaactaaaccatcacaagtgtgtgagccaggatcaaaggtcact
gggactacaaagacagctgtgaaaaacacagaggcacaagctgagcccatcacgaagcgt
gcagtctgcacaaaagattctaaggaccctgagagagacacccctgcaaagatattgggg
aatggcaaaaacgagagtgcccctgaggctggaaactcagcccactgcaacggaaggagt
aaatataagaggagcggcagagagtctctggtggagaaaaccactgaatgtaaacctaca
gaggcagagatgatagaggagaacgttctcagtgcagtttcgcagggcccctcttccact
cagggctccaggaaaggggagagtgagatgaaggaacaattggttggagatgtggagcca
gatatgtgtaggaatgacaggggagactctgaatctgaggttgggaaagggactccagaa
gttcaggaggctgaaactgtccatttaggtgctggagaacaatcaacgccctctaaagat
tccatttctacaatagaaggagaatctgaaaaagtggacgagtcaaaagaggacgctttg
gaagagcaacctgaaatcctggagccaatggtgaacttgacgtttgtgaagaacgaatca
tacgagaaaggcaacgaccttgtggtggtgaatgtgtacctgaaagagatctgcagggag
acggtcaaggtgctctttcgagagcaggacttcacaatcatctttcagaccagtgatcag
aattttttgcggtttcattcaagctgtggaccagacacagtctttaaatggcaggtgaaa
ctcaggaatcttatacaccctgagcagtgtgcctattctttcaccccattccgactcgat
atcacgttgaagaagaggcacagccagagatggggaggtctggaggctccagcaacacaa
ggacaccccaaacacactgggctaatattgacacttgctggagaggtgggactggagctg
cagaaatccagccgtgcagagggtccgcgcactaagacatcaagctcttgtgcagtgggt
ggcgccaaggtggctttgtctacaggacctgctactcttgaaaagacccagcctgggagt
agccagcacaccctgccaagcaaagaggaaccaaggtctgccgagaaagaaaaatcacgc
actgaggatggtgttccgattaaacaggagccccttgtaacatcacccaagccgacctgc
atggtgcccccgatgagccactctccggcgggcagcgagcaccttgaggaggtggaagag
aaggtgatgtgtctgcctggattcaccggactgttcaatctcggaaacacctgcttcatg
aacagcgttatccagtccctgtccaacactcgcgagctgcgtgattacttccatgatcaa
gcttttaaaacggagctaaattgcagtaaccccctggggactggaggccgtctagccatt
gagtttgcaggtttgctgcggtctctttggaagggaacgcacaacgcctttcagccctct
aacctaaaggctattgtggcaagtaaggccagccagttcacgggatatgcacagcatgac
gcccaggaattcatggcattcttattagatgggcttcacgaggacctgaacaggatccag
aacaaaccgtatacagagactgtagattcggatgggagaccagatgaggttgtggcagaa
gaggcctggcagcgacataaaatgaggaatgattccttcatagtggatctgttccagggc
cagtacaaatctaaactggtctgccctgtatgctcaaaggtgtccattacatttgaccct
ttcctgtacctgccagtcccattgcctcaaaaacaaaaggtgctgactatcttttacttt
ggcaaggaacctcataagaagccaattaagtttctgatgagtgtcagcaaggagaattcc
agcacgtccgacgtgcttgagtccatctccaagagtgtgagggttaaaccagagaacctg
aggcttactgaggtcattaagagtcgattccaccgtgtgttccttccctctcactcgctg
gatgcagtttctccctcagacactctcttctgttttgaagtactgtccaaggatctgact
aaagagaaagtgcttattctacaggtccagcagaggccccaggtcccctgcatctccatc
agtaagtgtgctgcttgtcagaagcccccacaggcggaggacaagaaggtgaaacgctgc
actcgctgctactgcgtcgggtactgcaacacggcttgtcagaggacccactggcctatt
cacaaaaatcagtgcaagccatatgttgaaaacattggctgtccgttcctgatcagtgtc
ccagagtctcgattaacgtactctcgccttgcccagctgttggaagggtactctaggtac
tctttgaatgttttccagcccccaatccagtctggcaaattgtccccggagccgagccag
tgcagagcagatctgcccccccaggttcctgagataccagacggctgctgtaaggagggc
tatctggatgagaccaaggagcatgaaaaggttatgcagtccctggaatcagacatgtgc
caggctgcaggggactcgaagagggataacgattccaccctcacggtcgactctgggtat
tccagtcaattacatgagtcccaggaacaagctggctgcgagaaggaaacgtcctgtgag
aaagcagtgaaacctgaagctgcagtcacgggttaccagaagcctacagagtcactcgcc
agctctgcatcacagttctacatctctgtcattaattcagcgaagaatgaggaaaaactt
gaggacaaaggcgatgtagtgttggatatacccgaagactcctctctggacctggtgtgg
aagaataatgagcggagcaaggagtacgtcctcatcgagtcaaaggagctggaatatgtg
gaggacccaggctctgccagcgaggcagctagggcaggacacttcaccctggagcactgc
ctcaacctcttcaccaggcctgaggtgctcgcacccgaagaggcatggtactgcccgaag
tgcaagcagcacagagaggcgtctaagcagctcatgctctggaggcttcccaacgttctg
atcatccagctgaagcgtttctccttccgtagttttatctggagggacaaaatcaatgac
atggttgacttccctgtcagaagcctggatctgagcaacttttgtaatgaccagaaggac
gaaaatcagcctcccatctatgacttatatggtgtgattaatcactatggtggaatgatt
gggggacattacactgcatatgctcgcctgcccagcgacaaaaacagccaacgcagtgat
gtaggatggcgactttttgatgacagcacagtgaccacagtggaggagagccaggtcgtg
acacgctatgcctacgtgctcttctaccgacgccgcaactctcccctggagagaccatca
cgatgtcctgccccccacaatacagaatcaccagcaatggccgaagctggcgccagtcag
gcttctctaatatggcaggaactggaggaggaagaggagggggaggaaggagcccagaca
ggaagaattgggcaactccgatcccgggccacaccagactctgcagcactgacaggtctc
tcagattactcggatgaagactatgtcagatattttgtccttggcacctttgcagcagtg
gtagccctggttatcaatgttttctatccattgatatctcagggtcactggagctag
DBGET
integrated database retrieval system
