Polyodon spathula (Mississippi paddlefish): 121328679
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Entry
121328679 CDS
T07273
Name
(RefSeq) microphthalmia-associated transcription factor-like isoform X1
KO
K09455
microphthalmia-associated transcription factor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137
Mitophagy - animal
pspa04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121328679
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121328679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121328679
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
121328679
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
121328679
NCBI-ProteinID:
XP_041129553
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Position
16:complement(31799693..31841627)
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AA seq
550 aa
AA seq
DB search
MQSESGIVPDFDVGEEFHEEPKTYYELKSQPLKNSNSSEQPGSSKPPLNSSTMTSRILLR
QQLMREQMQEQERREQRQKQQAAQYMQQRTTSSQTPAINVSIPTSLPTATPLPMEVLKAC
DLVSAVPACMGPHKAGLNEHLLKRNSKVQTHLENPTKYHIQQAQRQQVKQYLSTTLGNKL
PSHALSLPCTNQPIEHVMHPGPGNSAPNSPMAMLNLNNCEKEMDDVIDDIIGLESSYNDD
ILGLMDPGLQMANTLPVSANLLDMYSNQAMPPPGLNISNSCPANLPNIKREFTVTPAPAM
MHILENSGSCGSFESYQRPEGFPVEAEARALAKERQKKDNHNLIERRRRFNINDRIKELG
TLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRSKELENRQKKLEHANRHLMLRIQEL
EMQARAHGLSVVASSSLCSTELSPRIIKQESAQGDCNQEVYQHHPDLSHTTTLNLTDGTI
TFSDSLGHTDESGAYTAAAKVGSKLEDMLMDDALSPVGVTNPLLSSVSPGASNNSSRRSS
VSMEETDRGC
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctgaatcggggatagtacccgattttgatgtcggcgaggaattccatgaagaa
cctaaaacgtattacgagctgaaaagccagcccttgaaaaacagtaattcatcagagcag
cctgggtcctccaagcccccattaaactcttccactatgacgtcacggatcttgctacgg
cagcagctcatgcgtgagcaaatgcaagagcaggagcgtcgagaacagaggcagaagcag
caagcggcacagtacatgcagcagagaaccacaagcagtcagacaccagccatcaacgtc
agcatacccaccagcctgcctactgcaacaccattaccaatggaagtcctcaaggcttgt
gacctggtctccgctgtgccagcctgtatgggtcctcacaaagctgggctgaatgaacac
cttttaaaaagaaacagtaaggtgcaaacacaccttgaaaacccaaccaagtaccacatt
cagcaggcccagaggcagcaggttaagcagtacctctccaccactctcggaaacaagctt
cccagccatgccctcagcttgccctgcaccaatcaacccattgagcatgtaatgcatccg
ggacctgggaacagtgcccccaacagccccatggccatgcttaacttgaacaactgtgaa
aaagagatggatgatgtaattgatgacataatcggtttggagtcaagttacaatgatgac
atccttggacttatggacccaggactacaaatggccaacacgctccctgtttctgctaat
cttcttgatatgtacagtaatcaagcgatgccaccacctggccttaatatcagcaactcc
tgtccagctaatctacccaacattaaaagggaattcacagttaccccagctcctgccatg
atgcacattctggagaattctggatcttgtggcagttttgaaagctatcaaaggccagaa
ggttttccagtagaggctgaagctagagccttagcaaaggaaagacagaaaaaggacaat
cacaacttaattgaacgaagaagaaggtttaacattaatgatcgcattaaagagctggga
actttgattccaaagtcaaatgatccggacatgcgttggaacaaaggtaccattttgaaa
gcgtctgttgactatatccgtaaactccagagagagcagcaacgatcaaaggaacttgag
aacagacagaagaagctggaacatgcaaacaggcacctcatgctaagaattcaggagctt
gagatgcaagcccgggctcatggactctctgttgtggcctcatcaagtctctgctccacc
gaactttcgccaaggataattaaacaagagtcagcgcaaggagactgcaatcaggaggtt
tatcagcaccatccagacctgtcccacaccacaaccctcaatctcactgatgggactatc
accttcagtgatagccttggacacacagatgagtctggtgcctacactgcagccgccaaa
gtgggctccaaactagaagacatgttgatggacgatgctctttcccctgtgggagtgact
aacccgttactctcgtcagtgtcgcccggagcttctaacaacagcagcaggagaagcagc
gtaagcatggaagagaccgaccgtgggtgttag
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