Polyodon spathula (Mississippi paddlefish): 121328695
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Entry
121328695 CDS
T07273
Name
(RefSeq) integrator complex subunit 11-like
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121328695
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121328695
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GFIT
Motif
Pfam:
IntS11_C
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
121328695
NCBI-ProteinID:
XP_041129589
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Position
16:complement(19145497..19183583)
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AA seq
600 aa
AA seq
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MPEIQVTPLGAGQDVGRSCILVSIGGKNVMLDCGMHMGYNDDRRFPDFSYITQNSRLTEF
LDCVIISHFHLDHCGALPYMSEMVGFDGPIYMTHPTKAICPILLEDYRKITVDKKGETNF
FTSQMIKDCMKKVVAVNLHQTVQVDDELEIKAYYAGHVLGAAMFQIRVGLESVVYTGDYN
MTPDRHLGAAWIDKCRPDVLISESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVF
ALGRAQELCILLETFWDRMNLKAPIYFSTGLTEKANHYYKLFITWTNQKIRKTFVQRNMF
EFKHIKAFDRSYADNPGPMVVFATPGMLHAGQSLHIFKKWASNEKNMVIMPGYCVQGTVG
HKILSGQKKLEMEGRQTLEVKMQVEYMSFSAHADAKGIMQLIRMAEPRSVLLVHGEAKKM
EFLKQKIEQEFSINCFMPANGETATTVTNPSVPVDIALSLLKREAALGPLPDPKKPRTMH
GTLIVKDNSLRLVAPEQALKELGLSEHQLRFTCRVQIQDPQSEQDTLNTIYSHLKSVLKE
HSIQHLPDGTVMVESILIKVSAAAEEPSTKTLLVSWSYQDEELGGYLCTLLRKGLPQSTG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaatacaagttacacctttgggggccgggcaggatgtgggccgcagctgcatc
ttggtttctattggaggaaagaatgtgatgctggactgtgggatgcacatgggatataac
gatgatagacgttttccagatttctcctacattacacagaatagcagattaacagagttc
ctcgattgtgtcatcattagccatttccacttggaccactgtggagctctgccttacatg
agtgagatggtgggctttgatggacccatatacatgacgcatcccacaaaggccatctgc
ccaatcctattggaggattacaggaaaattacagtggacaagaaaggagaaaccaacttc
tttacatctcagatgatcaaagactgcatgaagaaagtggttgctgtgaatctgcaccag
acagtgcaggtagatgatgagctggagattaaggcctactacgcaggacatgttctgggt
gcagccatgttccagatcagagtgggcttggaatctgtggtgtacactggtgattataat
atgacacctgacagacatttaggggctgcatggattgacaaatgccgccccgatgtcttg
atctctgaatccacatatgccaccacaatccgagactcgaagcgctgccgagagcgagac
ttcctgaagaaggtgcatgaaacagtggagcggggaggaaaggtccttatccctgtcttt
gcactgggaagagcccaggaactctgtattttgctggaaacattctgggatagaatgaac
ctgaaggcaccaatttatttttccactgggctaacggagaaagcaaaccattattacaaa
ctgttcatcacgtggaccaatcagaagatccggaaaacatttgtacaaagaaatatgttt
gaattcaagcacataaaggcttttgacagatcatatgcagataatcctggacccatggtt
gtatttgctaccccaggaatgcttcatgcaggacaatctcttcacatctttaagaagtgg
gccagcaatgagaagaacatggtcatcatgccagggtactgtgtgcaaggcactgtggga
cataaaatattaagcggacagaaaaaactggagatggagggacgacaaactttggaagtg
aagatgcaggtggagtacatgtccttcagtgcgcacgcagatgccaaggggataatgcag
ctgattcgcatggctgagccgcgcagtgtcctactggtgcacggggaggccaagaagatg
gagttcctcaagcagaaaattgagcaggagtttagtatcaactgcttcatgcctgcaaat
ggagaaacggctaccactgtgaccaaccccagcgttcctgtggacattgcactgagcttg
ctgaagagggaggcagcgcttggtcccttaccagatccaaagaaaccaagaacaatgcac
ggtactcttatagtgaaggacaatagccttcgcctggtcgctcctgagcaggcattgaaa
gagctgggcctcagtgaacaccagctccgcttcacctgtcgagttcagatacaggatccc
cagtctgaacaggacactctcaacacaatctacagccatctgaagagtgtgctgaaggag
cactcaatccagcaccttcccgatggcactgtgatggtggagtccattctcattaaagtg
tctgccgctgcagaggagcccagcacaaaaaccttgctggtgtcatggagttaccaggac
gaggagcttggaggctacctgtgtactttactcagaaagggattgcctcagagtactggc
tga
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