Polyodon spathula (Mississippi paddlefish): 121328698
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Entry
121328698 CDS
T07273
Name
(RefSeq) peroxisome proliferator-activated receptor gamma-like
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03320
PPAR signaling pathway
pspa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121328698
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121328698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121328698
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pspa03310
]
121328698
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121328698
Nuclear receptors [BR:
pspa03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
121328698
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPARgamma_N
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121328698
NCBI-ProteinID:
XP_041129594
LinkDB
All DBs
Position
16:34799295..34826314
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AA seq
499 aa
AA seq
DB search
MQHCHYTVINPSLSLTGTAMVDTQLPMWQVSFGLNPVDMAELDDHSHSFDIKPYTTVDYS
GISNRSYDCSPPERVDLTELDCKYNFKLQEYHHTSAIKLEPPSPPQYSDKSFPFTKLHED
PLNATLSVECRVCADKASGFHYGVHACEGCKGFFRRTIRLKLVYDRCDLNCRIHKKSRNK
CQYCRFQKCLMVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQMNPESADLRVLAKHLYDS
YFKSFPLTKAKARAILTGKTGDKAPFVIHDMNSLKAGEHYISFKQPPVPDQGQQQNKDME
IRLFQSCQFRSVEAVREITEFAKSIPGFVNLDLNDQVTLLKYGVHEVIFSMLASVMNKDG
TLVSCGQGFMTREFLKSLRKPFCELMEPKFDFSVKFNALELDDSDLAVFISVIILSGDRP
GLVNVKPIEDLQDNMLQALELQLKMNHPDSPQLFAKLLQKMTDLRQIVTEHVQLLQLLKK
TELDMDIHPLLQEIIKDLY
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcagcattgtcattacactgtcattaatccaagtctttcattaaccggaacagccatg
gtagatacacagctgccaatgtggcaagtgagctttgggctgaatccagtggatatggca
gagctggatgaccactcccactcttttgacatcaagccctacacgacagtggattattcc
ggcatttccaaccggtcttacgactgcagcccgcccgagagagtcgacctgacagagcta
gactgcaaatacaattttaaattacaagaataccatcatacaagcgcaataaaacttgaa
ccaccatctccacctcagtactcagacaaaagctttccatttacaaaactgcatgaggac
cctttgaacgccacactgtccgtagagtgcagagtctgtgcggacaaggcctctggattt
cactacggagtccatgcatgtgaaggatgcaagggcttcttccgcagaacaatcaggttg
aagttggtatatgacagatgtgacctaaactgtcgcattcacaagaagagcagaaacaaa
tgccagtactgcaggttccagaagtgtctcatggtgggcatgtcacacaacgccatacga
tttggccgaatgccccaggctgaaaaagagaagcttttggcagagatctccagcgatatt
gaccagatgaatcctgagtctgctgatctcagagtccttgccaagcacttgtatgactca
tatttcaagtcctttcctctcaccaaagccaaggcgagggccatcttgacgggaaagaca
ggagataaagccccttttgtgattcacgatatgaactctttgaaggctggagagcattac
atcagcttcaagcagccccctgttccagatcaggggcagcaacagaacaaggacatggag
atccggcttttccaaagctgtcagttccgctccgtagaggcagtccgggaaattactgaa
tttgccaagagcatcccgggcttcgtcaatttggatctcaacgaccaggtgactctcctc
aagtacggcgtccacgaggtgatcttcagcatgctggcctctgtcatgaacaaggacggg
accctggtctcctgcggacagggcttcatgacccgcgagttcctcaaaagtctacgcaag
cccttctgtgagctgatggagcccaagtttgacttctctgtgaagttcaacgccttggag
ctggacgacagcgacctagcagtgttcatctctgtcatcattctcagtggagatcggcca
ggtttggtgaatgtaaagcccatcgaggacctacaggataacatgctgcaagctctggag
ctgcagctcaaaatgaaccacccagactccccccagctctttgccaaactgctccagaaa
atgacagacctgcggcagatcgtaacagaacatgtgcagctgctgcagctcctcaagaaa
acagagctggacatggacatccacccgcttctgcaggaaataatcaaggacttgtactag
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