Polyodon spathula (Mississippi paddlefish): 121328702
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Entry
121328702 CDS
T07273
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121328702
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121328702
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
DUF2570
Motif
Other DBs
NCBI-GeneID:
121328702
NCBI-ProteinID:
XP_041129609
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Position
16:complement(25225332..25229151)
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AA seq
414 aa
AA seq
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MERITAAQPPPSCTGKLSSLENTDLQGIDFSHMYVYKPRRGIKRGEDSKETYKLPHRLIE
KKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKTLTSLIEQQQQKIIAL
QNSLHAGEQSVESHDDSEGMFRSGFHMCAKEVLEYLSKQENSRELTPSNVMNHLQKVASE
VLQDSPSVRTEEQILKALVLKDEPSTSSQPRSFEGRGKNCVPVIQRTYTQAGGELSGSDT
DTDSGYGGELEKNYSAANRQSYSKENELKYTMTDRVNCIKQENEEPPTKRMRTESSEDES
LSGGELMGMHSSFLGFSPHQTPMCMPFYFIPPSAAAYLPMLEKCWYPASMPVLYPGLPDS
VSPLTGVLNPDKHPSSLLMSPRVGSPVAAQTPMDSPALLQALKQVFPLNLETKD
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggattacagcagcacagccaccaccttcctgcactgggaagctatcgtcgctg
gagaacacagacctgcaaggaatagacttttctcatatgtatgtttacaaaccaagaaga
gggatcaaacggggtgaagacagcaaggaaacgtacaaattgccgcacagactaatagag
aagaaaagacgcgataggattaacgagtgcattgcccaactgaaggatttgttgccagaa
cacctaaaacttacaactttgggtcatttggaaaaggcagtggttctggaactgactttg
aaacacgtgaaaaccctaacaagtcttatcgaacaacagcagcagaaaatcattgcgctg
cagaacagcttacacgctggggagcagtcagttgaaagccatgatgacagtgaggggatg
ttccgttcagggttccacatgtgtgccaaagaggtgctggagtacctgtcaaagcaggag
aacagcagggagctcaccccttcaaacgtgatgaaccacctccagaaggtggcatccgag
gtcctgcaagactctcccagtgtccgaacagaagagcagatcctcaaagcactcgtcctg
aaagacgagcccagcacctcctcgcaacctcggagcttcgaggggcgtggcaaaaactgc
gtgccggtcatccagagaacatacacccaggcgggtggggagctaagtgggagtgacacg
gacacggacagtgggtacggaggagagctggagaaaaattactctgcagccaaccggcag
tcctacagcaaagaaaatgaactaaaatacacgatgactgacagggtgaactgcatcaaa
caggaaaacgaagagccacctacaaaaaggatgaggacagaatcgtccgaagatgagtct
ctgtcaggcggggagctgatggggatgcacagcagcttcttaggtttctcccctcaccag
actcctatgtgcatgccattttattttatcccaccatcagcggcagcctatttgccaatg
ctggagaaatgctggtaccctgcctcaatgccggtcttataccccggtcttccagactcg
gtatcccctcttacaggggttctgaatccagataagcacccatcttctctcctaatgtct
cccagggtaggctcgcctgtagcagcccaaacccctatggactcccctgctttactacaa
gctttaaagcaagtctttcctttgaacctggaaaccaaagactga
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