Polyodon spathula (Mississippi paddlefish): 121328727
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Entry
121328727 CDS
T07273
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 3-like isoform X1
KO
K05722
FYVE, RhoGEF and PH domain containing 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121328727
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GFIT
Motif
Pfam:
RhoGEF
PH
SOS1_NGEF_PH
FYVE
IQ_SEC7_PH
RHG20_PH
DYH2-5-8_CC
Ribosomal_L32p
PH_11
Motif
Other DBs
NCBI-GeneID:
121328727
NCBI-ProteinID:
XP_041129660
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Position
16:complement(35714167..35769759)
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AA seq
905 aa
AA seq
DB search
MQGVTTGCSQALLQIKCRPVVSSSPLEIRGHLPHHSSVPCLQKTGTHCVNSTAALKRPPA
QKPQVPPKPVHLQTRGLDRRPRAIPPAPSRPLPADPHPKPGKNCVSAWKEDTESPNSVCL
LIEKFESSRYRIPILGVYRRSQLHLSLSMDPAQEPAECSDSEPPGSSDCSTTENLALPVS
EMMSDDTELSNLSALRIDDISSCNLKTTGDCPAVNGAAGSSQLNDNQDSMLEQNGNGKVP
NRDSGIDSPSCNVDGEVFSNEEAIDEEKKDESVAESEADTGTVNEAKESSVSSMEHKRDS
TQDEEDSDMDEGSSEEHETAEVPKTEQPDTAKCTEPQKLFNIARELLQTEEAYVKRLHLL
DQVFCTKLTEAGIPQDVITGIFSNITSIDRFHEQFLLPELKTRIMEEWNTNPRIGDILQK
LAPFLKMYGEYVKNFDRAMDLVNTWTQRSSQFKSVVQNIQKQEVCGNLTLQHHMLEPVQR
LPRYVLLLKDYLKKLPQDALDRKDAEKSLELISTAANHSNAAIRKMEKMHKLLEVYERLG
GEEDIVNPANELIKEGHIQKLSAKNGTAQDRYLFLFNNMVLYCVPKLRLMGQKFSVRQKI
DIAGMQVQENAKQNLTHTFAIIGKQRSLELQARTEDEKKDWIQVILATIEKHKQNSETFN
KAFNSSFSRDEDHPSDSPNVGFFSMDSLDGNTSTGGMDSCKKHPKSKREKEKQTCKGCNE
SFNSITKRRHHCKACGAAICAKCSEFKPLRVCNECFDSPLALPSSPGLETTGDQKKKAAV
EKQNSLAAENSLLCSSLHFQEKGKTWHKAWVSITRNEPLVLYLLPSSQEVRMPRAILLPG
YEISLATEKLDMKHVFKLSQSQHSILFSAEEEELQCKWIEILSKAVKGESGQEDLCSKTE
AKNSL
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggtgaccactggttgcagtcaagctttactgcaaattaaatgccgtcctgtt
gtctccagctcacccttggaaatcagaggccacctaccccaccatagctctgtaccatgc
cttcagaaaacagggacacactgtgtcaacagcactgctgcactgaagagaccacctgca
caaaaaccccaggtgccccctaagcctgttcatcttcagacccgtggtctggacagacga
cccagggcaatcccaccggcaccgtccagacctctgcctgcagacccgcatcccaagcca
ggcaagaactgcgtctctgcgtggaaggaggacacagaatcgcccaacagtgtgtgcttg
ctgattgagaagttcgaaagctccaggtacagaatacccattcttggagtctataggaga
agccagcttcatctgtctcttagcatggatcctgcccaggaaccagcagagtgttcagac
tctgaacctccaggttccagtgactgttcaaccacagaaaaccttgcgctccccgtctct
gaaatgatgtccgacgataccgaactctcaaacttaagtgcgctgcggattgacgatatc
agctcatgcaatttaaagaccactggggactgtcctgctgtgaacggggctgccgggtcc
agccagctcaatgacaatcaggactccatgttggaacaaaacggaaatggcaaggtaccc
aacagagacagtgggatcgatagcccttcatgtaacgtggatggagaggtgttttcaaat
gaggaggccatcgatgaggagaagaaggatgagagtgtcgctgagagcgaagcagacaca
gggacggtgaatgaagcgaaggagagttctgtttcgtccatggaacacaagagggactcg
acacaagacgaggaggatagcgatatggacgagggcagcagcgaagaacacgagacagca
gaagtgccaaaaacagaacagccagacacggccaagtgcacagagccacagaaattgttc
aacattgcaagggaactcctgcagacagaggaagcttacgtgaagagactccacttactg
gatcaggtattttgcactaagttaacagaggctgggattccacaagatgtgatcaccgga
atcttctccaacatcacttctatcgatcggttccacgagcagtttctccttcctgagctc
aaaactcgaatcatggaggagtggaacacaaatcctcgaataggagacattctgcagaag
ctggctcctttcttgaagatgtatggggaatacgtgaaaaacttcgacagagccatggac
ctggtgaatacatggacgcaaagatcatctcagttcaagagtgtggttcagaatatacag
aaacaggaagtgtgtgggaacctgaccttgcagcatcacatgctagagccggtgcagcgc
ctcccccgctacgtgctgcttctgaaggactacctgaagaaactgccccaggatgcactg
gacaggaaggatgctgaaaagtcactggagctcatctcaacagcagccaaccactcaaac
gcagctattcgaaagatggagaagatgcacaaactgctggaagtgtacgaaagactgggg
ggtgaagaggacattgtaaatcctgccaacgaacttatcaaagagggccatatccagaaa
ctgtctgctaaaaacggaacagctcaagataggtatttattcctgttcaacaacatggtg
ctgtactgtgtgccaaaactgcggctaatgggtcagaaattcagcgtgaggcagaagatt
gacatcgcaggcatgcaggtgcaagaaaatgccaagcaaaatttgactcacacatttgca
ataattggaaaacaaaggtctttggaattgcaagccagaactgaggatgaaaagaaggat
tggattcaggttatcctggctaccattgagaagcacaaacagaacagtgagacctttaac
aaggctttcaacagctcgttctcccgagacgaggatcacccctccgactcgcctaatgtt
ggctttttttcaatggattcactcgatggaaacacctctactggtgggatggattcttgc
aagaaacatcccaaatcaaagagggaaaaagagaagcaaacctgcaaaggctgcaacgaa
agctttaattccataacaaaaagacgtcatcactgcaaagcatgtggagcggccatctgt
gcaaaatgctccgagttcaaaccgctgcgggtgtgtaacgagtgtttcgattctccactg
gcactgccttccagcccaggacttgaaaccacaggggaccagaagaaaaaagcagccgtc
gagaaacagaattcgttagcagcagaaaacagcctcctgtgcagcagccttcatttccag
gagaaggggaagacctggcacaaagcttgggtctccattaccagaaacgagccactggtg
ttgtacctgctaccaagcagccaggaggttcgaatgccacgtgccattctgctgcccggc
tatgaaatcagcttggcaacagagaagcttgatatgaagcacgttttcaagctcagccaa
tcccagcacagcatattgttcagcgcagaggaggaggagctccaatgcaaatggatcgag
atcctttctaaagcagtcaaaggggagtcggggcaggaagacctctgcagcaaaactgaa
gcgaagaacagcctttaa
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