Polyodon spathula (Mississippi paddlefish): 121328739
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Entry
121328739 CDS
T07273
Symbol
sec61a1
Name
(RefSeq) protein transport protein Sec61 subunit alpha-like 1
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03060
Protein export
pspa04141
Protein processing in endoplasmic reticulum
pspa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
121328739 (sec61a1)
04141 Protein processing in endoplasmic reticulum
121328739 (sec61a1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121328739 (sec61a1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121328739 (sec61a1)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pspa02044
]
121328739 (sec61a1)
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
121328739 (sec61a1)
Secretion system [BR:
pspa02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
121328739 (sec61a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
121328739
NCBI-ProteinID:
XP_041129685
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Position
16:complement(38323335..38331500)
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AA seq
476 aa
AA seq
DB search
MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
MIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS
LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP
NLLNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN
LYVISQMLSTRFSGNFLVNLLGTWSDTSTGGPARAYPVAGLCYYLSPPESFGSVLEDPVH
TLVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTA
AAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggggataaaatttttggaagtaattaagcccttctgtgctgttctgccggaaatccaa
aagccggaaaggaagattcaattcagggagaaggtgctatggacagccatcacccttttc
atcttcttggtgtgctgccagattcctctctttggaatcatgtcctcggactcggcagat
cccttctattggatgagagtgatcctcgcttcaaacagaggtactctgatggagctgggt
atctcccccatcgtcacctctggtctcatcatgcagctcctcgccggtgctaaaatcatc
gaagtgggcgacacacccaaagacagagcgcttttcaacggggctcagaaattgtttgga
atgatcatcacgatcggccaggccattgtgtatgtgatgactgggatgtacggagatccc
tctgaaatgggagctggaatctgcttgcttatcatcattcagctgtttgttgccggtctg
attgtcctcctgctggatgagctgctgcagaagggatatggcctgggctctgggatctct
ctcttcattgccaccaacatctgcgagaccattgtgtggaaagccttcagccccacgact
gtgaacactggccgaggtacggagtttgaaggagccatcatcgcactcttccacctgctg
gccacgcgtacagacaaggtgcgcgcgctgcgggaggcgttctaccggcagaacctgccc
aacctgctcaacctgatcgccaccgtgttcgtcttcgctgtggtcatatacttccagggt
ttcagagtggacctgcccatcaagtctgcccgctatcgtggccagtacaacacctacccc
atcaagctgttctacacctctaacatccccatcatcctgcagtccgccctcgtctccaat
ctctacgtcatctcacagatgctgtccacgcgcttcagcgggaacttcctggtcaacctg
ctggggacctggtcggacacctcgacgggcggtccggcgcgtgcctaccccgttgccggg
ctgtgttactacctctctcccccggagtccttcggctcagtgctggaagacccggttcat
acgctcgtctacatcgtcttcatgctgggctcctgcgctttcttctccaagacgtggatt
gaagtctcaggctcttctgctaaggatgttgcaaagcagcttaaagaacagcagatggtg
atgagaggccatagagaaacctccatggtgcatgaattgaacaggtacatccccacagca
gctgcgtttggggggctgtgtatcggcgggctgtcggtcatggctgatttcctgggtgcg
attggatcagggacgggaatcctgctggccgtcacgatcatctaccagtatttcgaaata
ttcgtcaaggaacagagtgaagttggaagcatgggagccctccttttctaa
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