Polyodon spathula (Mississippi paddlefish): 121328744
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Entry
121328744 CDS
T07273
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48-like isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121328744
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121328744
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121328744
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121328744
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121328744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
121328744
NCBI-ProteinID:
XP_041129690
LinkDB
All DBs
Position
16:complement(16942437..16972596)
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AA seq
1055 aa
AA seq
DB search
MMAPRLQLERAAWRWIESVRPEDVKTEQIETAYRIRLQACKRGTCRRNCKGNPNCLVGIG
EHTWLGEIDENTFHSIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRQTLYL
CQNSRAEEHDAEDDTDYEPQTICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQQDA
QEFSKLFLSLLEDTLLKQKNPSVQNIIQQQFCGQCAYVTVCNQCGRESQLLSRFYELELN
IQGHKQLTDCVTEFLKEEKLEGDNRYFCESCQSKQNATRKIRLFSLPRILNLQLMRFVFD
RQTGHKKKLNTYISFPEIVDMGPYMERKDEKCVYELSAVLIHRGVSAYSGHYIAHVRDAR
TKDWYKFNDEEIEKMEGKKLQLGIEEDIAEPSKSQTRKPKCSKGFHCSRNSYMLVYKRQV
EEEVEKSQSEINVQVPDFLQKLVEKDNRKFEEWCAEMAEMRKQSVDKGKAKHEEVKEIYE
LLPAEDGQPYEFVPLEWLQKWLDDSTVTKSIDNSKFLCSHGKLHPDKVEDVKRISQKAAT
LFFSRYKGSPRLDGSALCQKCVIERCRVLRLKNQLNEDYKVISNLVKAAVDSNEGYWIGK
ASLRSWRQLALEQLDEKEEETRHTNGKTNGEGSAVLEAQEEALGNRKDEEDAEQNLHFNE
DILCSHGGLCISEIERKLVSTEVWNRLKVYFPKAPEFISNQESCQKCQTLEREDEENEAL
HKMMANDQKTALLNLFQDKNRPTLQKWPQESDVLYIVSLFFVEEWKKFIRRPARCNPVSS
VGNSALLCPHGGFMFTYDSMIKGDAKLIALLWPSEWDAISRFFLVDQPMKVSRRMEKTQN
DTVNYEYHTDPELCLECREGLLFQQQRDLREYTQATIYIRKVVDNKMIVKEAAPDLNVSG
SDAEDEREEPKAEGESDPDFNQSNDGAKRQKVSNPSTASSISTFTVHQKPGTRRSIRHRK
VRGEKALIVSANQTLKELKIQIMHAFSVAPFDQNLSVDGRYLTDDSATLGSLGVIPESVI
YFKADEPVADYTAMDDVFQVCMPEEGFKGTGLLGH
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgatggcccctcggctgcagctcgaaagggcagcctggcgctggattgagtcggtgaga
cccgaggatgtcaaaactgagcaaattgagaccgcataccgtatcagactgcaagcctgc
aagagagggacctgcagaagaaactgcaagggaaaccctaattgcttggttggtattgga
gaacatacttggttaggagaaattgatgaaaataccttccacagcattgacgatccaaac
tcagaaagaagagacaagaacacatttgttgggctgacaaatcttggtgccacctgttac
gtgaatacatttctacaggtgtggtttcataacctggaattgcggcagacgctttacctt
tgtcagaactccagggctgaagagcatgatgctgaagatgatacagattatgaaccacag
acaatatgtgaacatctgcagtacctgtttgcattgttgcagaacagcaacagaagatac
attgatccgtcgggacttgtgaaggcactggggttagatacaggtcaacagcaggatgcc
caggagttctcaaaactcttcctgtctcttttggaggacacactgttgaagcagaagaac
ccaagtgtgcaaaatattatacagcagcagttctgtggacagtgtgcttatgttactgtg
tgtaaccaatgtggcagagaatcacagctcttatcccggttctatgaactggagcttaat
atccagggtcataaacaactcacagactgtgtcactgaatttcttaaggaagagaaattg
gaaggggacaatcgatacttctgtgagagctgtcagagcaagcagaatgctaccaggaag
atccggctcttcagtcttccacgcattcttaacctgcagctgatgcgttttgtttttgat
agacaaactggtcacaaaaagaagctaaacacttatattagctttccagagatcgtggac
atgggcccctacatggaacgaaaagatgagaaatgtgtatatgagctgagtgcagttttg
atacacagaggagtaagtgcatactccggtcactacattgctcacgtgcgggatgccaga
actaaagactggtacaaatttaatgatgaagagattgagaaaatggaaggcaagaaactg
cagctaggaattgaggaggatatagcagagccttccaaatcccagacacgcaaaccaaaa
tgcagtaaaggatttcactgctcacggaactcgtatatgttggtttataagcggcaggta
gaggaagaagtagaaaaaagtcaaagtgagattaatgttcaggtgccggactttctgcag
aagttagttgaaaaagataacagaaagtttgaagagtggtgtgctgagatggctgagatg
cgcaaacagagtgtagacaaaggcaaagcgaaacatgaagaggtgaaggagatctacgaa
ttgttacccgccgaagacggtcagccatatgagtttgtgcctttggagtggcttcagaaa
tggctggatgattccacagttactaaatccatcgataactccaaattcctgtgttctcat
ggaaaactgcaccctgacaaagtcgaagatgtgaaacggatatctcaaaaagcagccacg
cttttctttagcagatacaagggtagccccaggttagatggttcagccctctgtcaaaaa
tgtgtcatagagcgatgcagagtgctcagattaaagaaccagttaaatgaagattataaa
gttatttcaaacttggtgaaagctgcggttgacagcaatgaaggatattggatcggtaaa
gcatctcttcgaagctggcgacagttggctttggaacagttggatgagaaggaagaggaa
acgaggcacaccaatggcaaaacaaatggcgaggggtcagctgttctggaggctcaagaa
gaggctcttggcaataggaaagacgaggaagatgcggagcagaatttacatttcaatgaa
gatattctctgttctcatggtgggctttgcatatctgaaattgagaggaagcttgtttcc
actgaagtctggaacagactgaaagtctattttcccaaagcaccggaattcatatccaat
caggagtcctgccaaaagtgccagacattggaaagagaagatgaggaaaacgaagctctg
cataagatgatggcaaatgaccagaaaacagctctactgaaccttttccaagacaagaac
agacccacgctgcagaaatggcctcaggagtcggatgttctttatattgtgtccctgttt
ttcgtggaggaatggaaaaagtttatcaggagaccagctagatgtaacccagtgtcctct
gttggaaacagtgccctgctgtgtccacatggtggctttatgtttacttatgattcaatg
atcaagggggacgcaaagctaatagctctgttatggcccagcgagtgggatgccataagc
aggttttttcttgtggatcagccaatgaaagtttccagaagaatggaaaaaacacaaaat
gacactgtgaactatgaataccacactgatccagagctctgtctggagtgcagagaagga
ttgctgtttcagcagcagagagacctgcgtgaatacacacaggccaccatctatatccgc
aaggtggttgacaataaaatgatagtgaaggaggctgctccagatcttaatgtgagtggc
tcagatgctgaagatgaaagagaggagccaaaggctgaaggagaaagtgaccctgatttt
aaccagtccaatgatggagctaaaagacaaaaggtgtccaatccaagcacagcatcaagc
atcagcaccttcactgttcatcagaaaccaggaacaaggaggagcatcagacatcggaaa
gtacggggggaaaaggcactgatcgtatctgctaatcagacgctgaaagaactgaagatc
cagatcatgcatgcattctctgtggctccctttgaccaaaacctgtctgtagatggacgt
tatctgactgatgattcagcaacattgggcagccttggagtcattcctgagtctgtcata
tattttaaggctgatgagccagtcgctgattacactgcaatggatgatgttttccaagtt
tgtatgcctgaagaaggttttaaaggtactggtcttttaggacactga
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