Polyodon spathula (Mississippi paddlefish): 121328747
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Entry
121328747 CDS
T07273
Name
(RefSeq) nischarin-like isoform X1
KO
K24095
nischarin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121328747
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
121328747
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
PX
LRR_8
LRR_9
LRR_NXF1-5
PH_PLEKHM2
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
121328747
NCBI-ProteinID:
XP_041129707
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All DBs
Position
16:complement(33900795..33914827)
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AA seq
1420 aa
AA seq
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MECAVFPEEANERKEICIVGSELVVENYTVYIIEVKVGNHKWTVKHRYSDFHDLHEKLTA
EKKIDKNLLPPKKIIGKNSKSLVEKRQKELEVYLQTLLAKFPLAAPKVLSCFLNFHLYEI
NGITASLAEDLFNKGEQLLVAGQVFCLRPLQLYAITQQLRLAKPTCANGDAKADLGHILD
FTCRLKYLKVSGTSQGSVGSSNIQEHLLPFDLSVFKSLLQIEISHCEAKQIQGLPSLKPT
LATMGVCYSASSMKDILVPESSEFDHWIAEGVSSDCPVTAVIPTWKNLTTLDMSHNHIMC
IDESVKLIPKVEFLDLSHNELSLVENLQHLYNLVHLDLSYNKLAVLEGVHTKLGNIKTLN
LAGNLLESLSGLNKLYSLVNLDLSNNKLAQLEEIKHIGSLPCLEKLNLSNNPLSIIPDYR
TKVLAQFWDRASEVCLDSTAPTEKEMDTVEVLKAIQKAKAAKDRMNNTEKKISEDSKLSA
ASSKVNYSSFTAPPSSPSLPHPASSSQEVVCKNTALVSNDISTPMDSAITQRCTNIQNSA
CEDTVQVKHTYGSSLLPINVTEQHFSYSCHCAKDEDSMWTNWKKTQVLPYSCVSYTATNL
DFTSHLTGLIRNAMWEEHFKASKTSTHVDTVHESLSQASGDGYFEMGLDEGEHGSGCTAS
PDATAESCEDAGEELIRIKKVFWVYCIQVSKDLSQFASCVVLTDNLLAVFQITHQELTGN
MHSVTGNIENVLTVPFVEIEAVSFDVPETCLSLKLKTSDTYWYFLSDSQNLKEIYSCLNM
FNSVVKNSNSAQDFINQLLESHQLTDGDTVVKGAFAAHLLNIAEIAPCNQQSHSFPTDSS
NEAKNSPCPNILSFTRQSETHQDSDYVPCLLFLTPSRLSIIKVDFVSLAKKARTLEEKRW
VEFIQIPLASVLLHPKQGCSSSTQPAGAFRDGHVLELVTRYKFVTAVFVLPNDKFLFLSL
FRQLRASLQDVKTIAFFKVKKCHSSTKSCPLSPTVTQRTLKSSPQGLQRPHLTLSLLYPS
DPLIQKLTDENQCPFHLSVSPSLRFLTGLKGNDLVEFFYNSVAEMGNEEIKHILWSSVVF
YKASDVEITACIMLSTKAVYFVLHDSAAQLGDQSLVWDWKPSDHEKRDFHHSYCFTIKLN
DLQSVKVGLFDQYFRVAGPSADHIISCLTRDSYGTHAFIQQLMSVLSFLAKTPSPEPVEQ
DFYTEFGNKSTGKMENYELVHSSRVKFIYPSEEEIADLTYIVAEKMGDLANLHAYNILLY
VLAFQVCHSKSTTSEDQHLLHPKTLILTGSDMFLFDEDYVSYPLPDFAKEPPRRDKYRLT
DARRIRDLDRVLMGYQTYPQALTFVFDDVESPDLLCNLTMDHFANEFNTSGIKTRTGSVD
KEIQWCIFVPGSDSREKLVSLLARQWELLCSRELPLELTG
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtgcggtgtttcctgaagaggcaaacgaaaggaaggaaatctgcattgtggga
tctgagctcgtcgtagaaaactacacggtttacataatagaggtgaaagttggaaaccac
aagtggactgtcaagcaccgctatagtgattttcatgatctgcatgaaaagctcaccgcg
gagaagaagatcgacaagaacctgcttccaccaaagaaaatcattggtaaaaactctaaa
agcctggtggaaaagagacaaaaggaactcgaagtatacctgcaaactctgctggccaaa
ttccctctggctgcacccaaagtcttgtcttgttttctgaattttcatctatatgaaata
aatggaattacagcatcactggctgaagatctgtttaataaaggagagcaacttcttgtg
gccggacaggtattctgtctccggcctttgcagttatatgcaatcacccagcagctccga
ctggccaaacccacctgtgctaatggggatgctaaggcagacctggggcacattctagat
tttacctgtaggctcaaatatttgaaggtcagtggcacctctcaaggttctgtgggcagc
agcaatatccaggagcatctcctcccatttgacttatcagtattcaagtcacttcttcag
atagagattagtcactgtgaagcaaaacagatacaaggacttccttctttaaagccaacc
ttggctacaatgggtgtgtgctattcagcatcatcaatgaaggatatattggtaccagaa
tcctctgaattcgatcactggattgctgagggagtgtcatcagactgtccagtcacagcc
gtcattccaacttggaagaacttaacaacacttgacatgagtcataatcacataatgtgc
attgatgagtccgtgaaattgataccaaaagttgaattcctggacctcagtcacaacgaa
ctgtctcttgtagagaacttgcagcatctgtataacctggttcacctggatctgtcctac
aataaacttgcagtattagaaggtgttcacacaaagcttggaaacatcaaaacgctcaat
ttggcaggaaatcttctggaaagtctttctggtcttaataaactttattctcttgtaaac
ttggatttaagcaacaataaactagcccagttagaggaaattaaacacattggaagttta
ccctgtttggaaaaactgaatctgtccaacaaccccttgagcatcattcctgattacaga
accaaggtgcttgcacagttttgggacagagcatcagaggtatgcttagacagcactgct
ccaacagagaaggagatggacactgtggaagtgttaaaagccattcagaaagccaaagca
gcaaaggacaggatgaataatacagagaaaaagatcagtgaggactccaagctttctgct
gccagttccaaagtcaactactcctctttcactgctccaccctcctctccctctctgccc
catcctgccagctccagccaagaagtagtttgtaaaaacacagccctagttagcaatgat
atatcgactcctatggattctgcaattacccagagatgcaccaacatacaaaattctgct
tgtgaggacacagtacaggttaaacatacatatggatccagtttgttacccataaatgtg
actgaacagcacttcagttacagttgccactgtgcaaaagacgaagacagcatgtggacc
aattggaaaaagacccaagtgctaccttattcttgtgtctcttacactgctactaacctg
gactttacttcacatttaactggacttattaggaatgccatgtgggaggaacatttcaaa
gcatccaagaccagcacgcatgtagatacagtccatgaatcattgagccaggcttcaggg
gatggctatttcgaaatgggacttgatgagggggagcatggttcaggttgcactgcctct
ccagatgctacggctgaaagttgtgaagatgcaggtgaagagcttatccgaattaagaaa
gtcttttgggtttactgcattcaggtgagcaaagatttaagccagtttgcatcttgtgtt
gtgttgactgacaatctgctggctgtgttccaaattactcatcaagaactgactggaaac
atgcacagtgtcacgggaaacattgaaaacgtcttgaccgtcccattcgtagagatagaa
gcagttagctttgatgttccagaaacctgtctttcattgaaattgaagacaagtgatact
tactggtactttctttcggattcccagaatttgaaagagatctactcttgtttaaacatg
tttaattcggttgtgaaaaattccaattcagcacaggattttatcaatcaacttttggag
tcccatcagctaacagatggtgacactgttgttaaaggtgcctttgccgctcatcttctt
aacattgcagagattgccccctgtaatcagcaaagccacagcttccccactgactcttca
aatgaggcgaagaactctccgtgtccgaatatcctctcattcacgcggcagtcggagaca
caccaagactctgattatgtgccctgcctgctcttcttaacacccagtcggctgtctatt
ataaaagtggactttgtttcactcgcaaaaaaagccaggacacttgaagagaagagatgg
gtggagttcattcagatccctcttgcttctgtgcttctccatcccaaacaaggctgcagt
agcagcacccagccagctggtgccttcagggatggccatgtcctggaacttgtgacccgg
tacaagtttgtcactgctgtctttgtcctgccaaatgacaagttcttgtttctgagtctg
ttcaggcagcttagagccagcctgcaggatgtgaagaccattgctttcttcaaggtgaaa
aaatgtcacagttcaacaaagagctgtcccttgagccccacagtgacccaaagaactctt
aagagcagccctcagggtctccaaaggcctcatttaaccctgtccttgctgtatccttca
gaccctttgatacagaaactgactgatgaaaaccaatgtccatttcacctgtctgtttcc
ccatctcttcgcttcttaacaggactgaaagggaatgatttggtggagtttttctataac
agtgttgctgagatggggaatgaagagataaagcacatcttatggtcctctgtggtgttt
tataaagcttctgatgtggaaatcactgcctgcattatgctgtctacaaaagcggtttat
tttgttcttcatgattctgctgctcaacttggtgatcaatcattagtttgggattggaag
ccctctgatcatgaaaaaagagactttcaccattcttactgcttcacaataaagctgaat
gacctgcaatcagtaaaggttgggctttttgatcagtacttcagagtagcgggaccttca
gcagatcacatcatctcctgtctgacaagagacagctacggtactcatgcctttatacaa
cagctcatgtctgtcctgtccttcctagcaaagacaccatctccagagccagttgaacaa
gatttctacactgaatttggaaacaaaagcacaggcaaaatggaaaactatgagcttgtt
cattctagtcgagtgaagttcatatacccaagtgaggaagagatcgcggacctgacctat
attgttgcagagaaaatgggagacctggctaatctgcacgcgtataacatccttctgtac
gtactagcctttcaagtgtgtcactccaaaagcacaacatcagaggaccagcatcttctt
catcccaaaacactaattctcaccggctcggacatgttcctgtttgatgaggattatgtc
agctacccattgcctgattttgctaaggaaccccctcggagagacaaataccgcttgacc
gatgccaggagaatccgtgaccttgatcgggtgttgatgggctatcagacgtacccgcaa
gcacttacctttgtgtttgatgatgttgaaagtcctgatttattatgcaacttgacaatg
gaccattttgccaatgagtttaatacttcaggcataaaaacaagaacgggcagtgttgac
aaggagatccagtggtgcatttttgtgcctggttcagacagccgagaaaagcttgtttcc
ttgttggctcgccagtgggagctactctgcagcagggagctaccactggagctcactggc
taa
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