Polyodon spathula (Mississippi paddlefish): 121328750
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Entry
121328750 CDS
T07273
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121328750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121328750
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121328750
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121328750
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121328750
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121328750
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PH_21
BAR
PH_11
ALA1
PH_8
LMBR1
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
121328750
NCBI-ProteinID:
XP_041129715
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All DBs
Position
16:1054100..1206998
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AA seq
886 aa
AA seq
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MTIDFEECIKDSPRFRATIDEVENDVVEIEAKLDKLVKLCSGMIDAGKAYISANKLFVNG
VRDLSQQCKKDAMISECLEKCGETLQEMINYHMILFDQAQRSVKQQLQNFVKEDVRKFKE
TKKQFDKVREDVEIAQVKNAQAPRNKPHEAEEATGTLTVTRKCFRHLALDYVLQISVLQA
KKKFEILDAMLSFMHSQYTFYQQGYKLLDEIDPYMKKLAAELDQLVIDSAVEKRDMEHKH
AIIQQRTLMQDFSYDDSKAEFNVDASNGVVVEGYLFKRASNAFKTWNRRWFSVQNSQLVY
QKKLKDTLTVVVEDLRLCSVKPCEDIERRFCFEVVSPTKSCMLQADSEKLRQAWIHAVQA
SIASAYRESPDSFCIQKLDRTASPSTSSIDSASDSRDRSLKGESILQRVQSIPGNEVCCD
CGQADPRWASINLGILLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELGNNIMN
HIYETRYEELGLKKPVSSSSRQEKEAWIKAKYVEKKFLKKMPIVEALREVEQKSRRWSVK
KCQRHNSSTKVPATRRRYRQEVGNASPATLVSGTAQLCQDGAQCREPVKSAAALERKFRR
DSLFCPDELDTLFSYFDTGSGPRSPAGLSSDSGLGGSTDGSTDILVFGSVVDSVTEEECE
VSEESSGEAEIEQEASDTEDLRELTPGMLIYKAAQARNMPVMAEALAHGADVNWINDEDE
NKTPLIQAVTGGSLIACEFLLQNAADVNQRDIRGRGPLHHATYLGHTGQVCLFLKRGANQ
HGEDADGQDPLSIAVQAANADIVTLLRLARMNEEMRESEGPFGQPGDATYLDIFREFSHM
ASNNPEKLNRRSAHFSHSCRKGRELASLDLLLLEMSPQPVNENNVN
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgattttgaagaatgcattaaagattctcccagattcagggccaccatagat
gaagtggaaaatgatgtggttgaaattgaagcaaagctagacaagctggtgaaactctgc
agtgggatgatagatgctggaaaggcctacatcagtgccaacaaactgtttgtgaacggc
gtccgagacctgtcacagcaatgcaaaaaggatgccatgatttcagaatgtctggagaag
tgtggagagacccttcaggaaatgatcaactaccacatgatactttttgatcaagctcaa
agatctgtcaagcaacagcttcagaattttgtaaaagaggatgtgcggaaattcaaagag
accaagaagcagtttgataaagtgagggaagacgtggagatcgcacaggtgaagaacgca
caggccccccgaaacaaaccccacgaggcagaggaagccacgggaacccttaccgtcacc
cgcaagtgcttcagacacctggcactcgactacgtgctgcagatcagcgttcttcaggcg
aagaagaaatttgaaatattagatgcgatgctgtctttcatgcactcccagtacactttc
tatcaacaaggctacaagctgcttgatgaaatcgacccctacatgaagaagcttgcggca
gagctggatcagctggtgattgactctgcagttgagaagagggatatggagcacaaacat
gcaatcatacaacagcggactcttatgcaggacttttcctacgatgactccaaagcagag
ttcaatgtggacgcctctaatggagtggtcgtggaaggctatctgtttaagagagccagc
aatgccttcaagacatggaacaggaggtggttctcagtacagaacagccagctggtgtac
cagaagaaactaaaggatacactcactgtggtggtggaggacctgaggctttgctcagtc
aagccttgtgaggacattgagcgccgcttctgctttgaagtcgtctccccgacaaagagc
tgtatgctgcaagctgactctgagaagctgcgtcaggcctggatccacgctgtgcaggcc
agcatagcctccgcctacagggagagcccagacagtttctgcatccaaaagctggaccgc
accgcttccccctccaccagcagcatcgactctgccagcgactctcgagaccgcagcctc
aaaggggagagcatcctgcagcgcgttcagtccatcccggggaacgaggtgtgctgtgac
tgtggacaggcagacccacgctgggccagcatcaacctgggcatcctgctgtgcatcgag
tgctcggggatccacaggagtttgggtgtccactgctctaaggtccgttcgctcacttta
gactcctgggaaccggagctactgaagctgatgtgtgagttgggtaacaatattatgaac
cacatttatgaaaccaggtacgaagagcttggtctcaagaagccggtatcttccagttca
aggcaggagaaggaggcttggatcaaagccaaatatgtggagaaaaagttcctgaagaag
atgcccattgtagaggctctgagggaagtggagcagaaatcacgccggtggagcgtgaaa
aaatgccagagacacaacagctccaccaaagtaccagccactcgcaggagatacagacag
gaagtggggaatgcatcccctgcaaccctcgtctcaggtacagcgcagctctgccaggat
ggagcccagtgtagagagcctgtcaaatcagcagctgctctagagaggaagttccgcagg
gactcgctcttctgtcctgatgaactcgacaccctcttctcctacttcgacacggggtct
gggccacgcagtcctgcaggtttgagcagtgacagtggtctgggaggcagtacggatggc
agcacagatatcctggtcttcggttcagtggttgacagcgtcaccgaagaagagtgcgag
gtttccgaggagtcgagtggggaagctgagattgagcaggaggcatcggacacggaggac
ctgagggagctgaccccggggatgctcatttacaaggcagcccaggctcgcaacatgcca
gtcatggcagaagccttggctcacggagctgacgtcaactggattaacgacgaggatgag
aacaagacccctctcatacaagcggttactgggggttctttaatagcctgcgagttcctt
ctgcagaatgcggctgacgttaaccaaagagacatccgtggaaggggcccccttcaccac
gccacatatctgggacacaccggtcaagtatgcctgtttctgaaaagaggagccaatcag
cacggtgaagacgcggacgggcaggaccccctcagcatagctgttcaagctgccaacgca
gacatcgtcaccctgctgcggctggctcggatgaatgaggagatgcgggagtctgaaggc
ccttttggacagccaggagatgccacctaccttgacatctttagagaattctctcacatg
gcatcgaacaatcctgaaaagctgaaccgccgcagtgcgcatttcagccattcctgcagg
aaaggaagagagctagcctcactggacctgcttctacttgaaatgtctccacagccagtt
aatgagaacaatgtcaactag
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