Polyodon spathula (Mississippi paddlefish): 121328816
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Entry
121328816 CDS
T07273
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04260
Cardiac muscle contraction
pspa04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121328816
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121328816
04261 Adrenergic signaling in cardiomyocytes
121328816
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121328816
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121328816
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
Cache_3-Cache_2
DUF2201
Motif
Other DBs
NCBI-GeneID:
121328816
NCBI-ProteinID:
XP_041129831
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Position
16:36803551..36989207
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AA seq
1117 aa
AA seq
DB search
MAIRAQSCSLFCFVSIQTVLIFSLSAPGTNGFLFPQHYTMQYWAGRIEQEIDRVVRLVSG
VQQIKGIYNEKRNQFEIKKNSPKELVEKVALDIEKLLAKKRKALERLARAAEVFQRANAW
KDNIKENEIEYYDAKADSEYGDEFDGEEGAQTKSTSQQLQLTFVDDPNFKNQVNYSSTAV
QIPTDIYKGSAVILNELNWTAALEEVFIQNRNEDPSLLWQVFGSATGLTRYYPATPWKPP
NKIDLYDVRRRPWYIQGASSPKDMVIIVDVSGSVSGLTLKLMKKSVEEILDTLSDDDYVN
VGKFSETAEQVSCFDHLVQANVRNKKMFKRDVDNMTAKGTTDYKSGLEFAFNQLLNRSSA
PRANCNKIIMMFTDGGEDRVQDVFEKYNWPNKTVRVFTFSVGQHNYDVTPLQWMACANKG
YYYEIPSIGAIRINTQEYLDVLGRPMVLAGKKAKQVQWTNVYQDALGLGLVVTGTMPVFN
LTMEGNMQNQLLLGVMGVDIPLNEIKKLTPQYNLGANGYMYAVDPNGYVLLHPNLQPKII
NFREPVTLDLLDAELEDENKQQIRRDMIDGKPGEKRIRTLIKSIDERYIDESVRTYTWAP
VNGTDYSLGLVLPPYSFHYIRANLSDQILQVQLQTNFNKDFESLLPSSFESEGHVFIAPR
EYCKDLQLSDNNTEFLDNFIALMEKVTPDSKQCDNFLLHNLILDTGIIRQLVDRVWKNWD
LNTYGLLAVFAATNGGITRVFPHKAAEDWDENPEPFNTSYYRRSLDNTGYIFRAPYRDQN
SDPLDPVNDTIGILVSTAVDININGKVLKPAVLGVKLDLESWVEKFKILASNQTDNRQGS
RKCGPGGACEMDCEVNSDDLLCVLIDDGGFLVMSNQQSHWTQVGMFFSEVDSSLMNTLYN
KSFYKRKESYDYQSVCTPTPNSNTGAARRGIFVPTIADFLNLAWWTSAAAWSLFQQFLYG
LAYNSWLSVDDVTADGMDSREVSCITKQTQFYYGNRTVAYNQMIDCGNCSRLFSAQRLSN
TNLLFVVADKMMCSSCDTGKLSQSETGSEGPHPCSQIDSPRYRRGPPTCFDYSVLENSSD
CGRGFSFRPSLGVLMSLQLLLLCLTAGPQLFPTPFCL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggcgatccgtgctcaatcctgcagcctcttctgcttcgtctcaattcaaacagtcctc
attttcagcttgtcagctcccgggacgaatggcttcttatttccccagcattacacaatg
cagtactgggctgggcggatagagcaggagatcgaccgagtggttcggctggtcagtgga
gtccagcagatcaaagggatttacaatgagaaaagaaaccagttcgagatcaaaaagaac
tctcccaaagagcttgtggagaaggtggcattggacatcgagaagctgctggcaaagaag
cggaaggcgctggagaggctggcgagggctgccgaggttttccagagagcaaatgcctgg
aaggacaacattaaggaaaatgagattgaatattacgatgccaaagcagactctgaatat
ggtgatgaatttgatggtgaagaaggagctcagacgaaatccaccagtcagcagctgcag
ctgactttcgtagacgatcccaactttaaaaaccaggtcaactactccagcaccgctgtg
cagatccccactgatatctacaagggctctgcggtcatcctgaatgagttgaactggaca
gccgctctggaggaggtgttcatacagaatcgtaacgaagacccgtccctgctctggcag
gtgttcggcagtgcaacgggactgacccgctattacccagccaccccatggaaaccgccc
aataagattgacctgtatgacgtccgaaggagaccctggtacatccagggggcttcttct
ccaaaggacatggtcatcattgtggacgtgagcggcagtgtcagtggcctgactctgaag
ctgatgaagaaatcggtcgaagagatactggacactctctcagacgacgactatgtcaac
gttgggaagttcagcgagacggccgagcaggtgtcatgcttcgatcacctggtccaggcc
aatgtgcgcaacaagaagatgtttaagagagacgtggacaacatgacggccaagggcacg
actgactacaagtccggcttagagttcgccttcaaccagctgctcaacaggtccagcgcc
ccccgggcgaactgcaacaagatcatcatgatgttcacggacggcggagaggatcgtgtt
caggacgtcttcgagaagtacaactggcccaacaaaacggtacgagtcttcaccttctca
gtgggacagcacaactatgacgtcacccccctgcagtggatggcctgtgccaacaaaggt
tactactatgagattccctcaatcggcgctattcgaatcaacacccaggagtatctggat
gtcctgggacgccccatggtcctggctggaaagaaagcgaagcaggttcagtggacaaac
gtctaccaggacgccttgggtctggggctggtagtgactggaacgatgccagtcttcaac
ctcaccatggaaggaaacatgcagaaccagcttcttcttggagtgatgggagtggacatc
cccctgaacgagatcaagaaactgacgcctcaatacaacctgggagccaatggatatatg
tatgctgttgacccgaatggctacgtgctcctgcaccctaacctgcagcccaagatcatt
aacttcagagagccggtcacgctggacctcctggatgcagagctcgaggatgagaacaag
cagcagatccgtcgtgatatgattgatgggaaaccgggagagaaaagaatcagaaccctc
attaaatcgatcgatgagaggtatatcgatgagtcggtacggacgtacacatgggctccg
gtaaatggcacggactacagcctggggctggtgttgcctccctacagtttccactatatc
cgagccaacctgagtgaccagatcctgcaggttcagttgcaaaccaactttaacaaggat
tttgaatctctgctgccaagcagttttgagtccgagggacatgtattcattgctcccagg
gaatactgcaaggatctgcagctctctgataacaacacagaattcctggacaacttcatc
gcgctcatggagaaggtcactccagactccaagcagtgtgataacttccttctgcacaac
ttgatcctggacacagggattatcagacagcttgtggacagagtgtggaagaactgggac
ttaaacacgtatggattgctggcagtgtttgcagccacaaatggaggaatcacacgagtt
tttccccacaaggctgctgaggactgggatgagaacccggagcccttcaataccagttac
taccggagaagtctcgacaataccggatacattttccgggcgccctacagggatcaaaac
tctgacccgctggacccagtgaacgacaccattgggatcctggtcagcaccgctgtggat
atcaacataaatggcaaggtcttgaagcctgcagtgctcggggtgaagctggatctggag
tcctgggtggagaagttcaaaatcctggccagtaaccagactgacaacaggcagggatct
cgcaagtgtgggccagggggtgcctgcgagatggattgtgaagtcaacagtgatgatctg
ctgtgtgttctcattgacgacggaggattcctggtcatgtccaaccagcagagtcactgg
acccaggtcggcatgttcttcagcgaggtggactcctccctgatgaacaccctctacaac
aaatccttctacaagaggaaggagtcctacgactaccagtctgtctgcacccccaccccc
aacagcaacaccggagcagcccgcagaggcatctttgtgcccacaattgcagatttcctg
aatttagcctggtggacctcagccgctgcctggtccctgttccagcagtttctgtatggc
cttgcatacaacagctggcttagcgtagatgatgtcacagcagacggcatggactcccga
gaggtcagctgcatcacgaagcagacgcagttttactacggcaacaggacggtcgcgtac
aatcaaatgatagactgtgggaactgctccaggctgtttagtgcccagaggctctccaat
accaacctgctgtttgtggtggctgacaagatgatgtgctcctcctgtgacacagggaaa
ctgagccagtccgagacagggtctgagggaccacacccgtgtagccagattgacagcccc
cggtatcggagaggaccccctacctgcttcgattacagcgtcttggagaactcttctgac
tgtggccgaggcttctccttcagaccctctttaggagtgttgatgtccctccagctgttg
ctgctgtgtttgactgccggcccccagctcttccccacgcccttctgcctttaa
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