Polyodon spathula (Mississippi paddlefish): 121328823
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Entry
121328823 CDS
T07273
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121328823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121328823
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121328823
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121328823
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121328823
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121328823
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PH_21
BAR
PH_11
PH_8
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
121328823
NCBI-ProteinID:
XP_041129844
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All DBs
Position
16:complement(18937734..19097135)
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AA seq
868 aa
AA seq
DB search
MTIDFEECIKDSPRFRATIDEVENDVVEIEAKLDKLVKLCSGMIEAGKAYISANKLFVNG
IRDLSQQCKKDAMISECLEKCGESLQEMINYHMILFDQAQRSVKQQLQNFVKEDVRKFKE
TKKQFDKVREDVEIAQVKNAQAPRNKPHEAEEAMGTLTVTRKCFRHLALDYVLQISVLQA
KKKFEILDAMLSFMHSQYTFYQQGYKLLDEIDPYMKKLAAELDQLVIDSAVEKRDMEHKH
AVIQQRTLMQDFSYDDSKAEFNVDASNGVVVEGYLFKRASNAFKTWNRRWFSVQNSQLVY
QKKLKDTLTVVVEDLRLCSVKPCEDIERRFCFEVVSPTKSCMLQADSEKLRQAWIHAVQA
SIASAYRESPDSFCIQKLDRTASPSTSSIDSASDSRDRSLKGESILQRVQSIPGNEVCCD
CGQADPRWASINLGILLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELGNNVMN
HIYETRYEELGLKKPVSSSSRQEKEAWIKAKYVEKKFLKKMPIVEALRDVEQKSRRWSVK
KCQRHNSSTKVPATRRRYRQEAGNASPATLVSAAALERKFRRDSLFCPDELDTLFSYFDT
GSGPRSPAGLSSDSGLGGSTDGSTDILVFGSVVDSVTEEECEVSEESSGEAEIEQEASDT
EDLRELTPGMLIYKAAQARNMPVMAEALAHGADVNWINDEDENKTPLIQAVTGGSLIACE
FLLQNAADVNQRDIRGRGPLHHATYLGHTGQVCLFLKRGANQHGEDADGQDPLSIAVQAA
NADIVTLLRLARMNEEMRESEGPFGQPGDATYLDIFREFSHMASNNPEKLNRRSMHFSHS
CRRGRELASLDLLLLEMSPQPVNENNVN
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgattttgaagaatgtattaaagattctcccagattcagggccaccatagat
gaggtggaaaatgatgtggttgaaattgaagcaaagctagacaagctggtgaaactttgc
agtgggatgatagaagctggaaaggcctacatcagtgccaacaaattgtttgtgaacggc
atccgagacctgtcacagcaatgcaaaaaggatgccatgatttcggaatgtctagagaag
tgtggagagagccttcaggaaatgatcaattaccacatgatactttttgatcaagctcaa
agatctgtcaagcaacagcttcagaattttgtaaaagaggatgtgcggaaattcaaagag
accaagaagcagtttgataaagtgagggaagacgtggagatcgcacaggtgaagaatgca
caggccccccgaaacaaaccccacgaggcagaggaagccatgggaaccctcaccgtcacc
cgcaagtgcttcagacacctggcactcgactacgtgctgcagatcagtgttcttcaggca
aagaagaaatttgaaatattagatgcgatgctgtctttcatgcactcgcagtacactttc
tatcaacaaggctacaagctgctcgatgaaatcgacccctacatgaagaagcttgcagca
gagctggatcagctggtgattgactccgcagttgagaagagggatatggagcacaaacat
gcagttatacaacagcggactcttatgcaggacttctcctacgatgactccaaagcagag
ttcaatgtggacgcctctaacggagtggtcgtggaaggctatctgtttaagagagccagc
aatgccttcaagacatggaacaggaggtggttctcagtacagaacagccagctggtgtac
cagaagaaactaaaggacacactcactgtggtggtggaggacctgaggctttgctcagtc
aagccttgtgaggacattgagcgccgcttctgctttgaagtcgtctccccaacaaagagc
tgtatgctgcaagctgactctgagaagttgcggcaggcctggatccatgctgtgcaggcc
agcatagcctccgcctacagggagagcccagacagtttctgcatccaaaagctggaccgc
actgcttccccctccaccagcagcatcgactctgccagcgactctcgagaccgcagcctc
aaaggggagagcatcctgcagcgcgttcagtccatcccggggaacgaggtgtgctgtgac
tgtggccaggcagacccacgctgggccagcatcaacctaggcatcctgctgtgcatcgag
tgctcgggcatccacaggagtttgggtgtccactgctctaaggtccgttcgctcacttta
gactcctgggaaccggagctactgaagctgatgtgtgagttgggtaacaatgttatgaac
cacatttatgaaaccaggtacgaagagcttggtctcaagaagccagtatcttccagttca
aggcaggagaaggaggcttggatcaaagccaaatatgtggagaagaagttcctgaagaag
atgccaattgtagaggctctgagggatgtggagcagaaatcacgccggtggagcgtgaaa
aaatgccagagacacaacagctccaccaaagtaccagccactcgcaggagatacagacag
gaagcggggaacgcatccccagcaacccttgtctcagcagctgctctggagaggaagttc
cgcagagactcgctcttctgtcctgatgaactcgacaccctcttctcctacttcgacacg
gggtccgggccacgcagtcctgcaggtttgagcagtgacagtggtctgggaggcagtacg
gatggcagcacagatatcctggtcttcggttcagtggttgacagcgtcaccgaagaagag
tgcgaggtttccgaggagtcgagtggggaagctgagattgagcaggaggcatcggacacg
gaggacctgagggagctgaccccggggatgctcatttacaaggcagcccaggctcgcaac
atgccagtcatggcagaagccttggctcacggagctgacgtcaactggattaacgacgaa
gatgagaacaagacccctctcatacaagcggttaccgggggttctttaatagcctgcgag
ttccttctgcagaatgcggctgacgttaaccaacgagacatccgtggaagaggacccctt
caccacgcaacatatctgggacacaccggtcaagtgtgcctgtttctgaaaagaggagcc
aatcagcacggtgaagatgcggatgggcaggaccccctcagcatagctgttcaagctgcc
aacgcagacatcgtcaccctgctgcggctggctcggatgaatgaggagatgcgggagtct
gaaggccctttcggacagccaggagatgccacctaccttgacatctttagagaattctct
cacatggcatcgaacaatcctgaaaagctgaaccgccgcagtatgcatttcagccattcc
tgcaggagaggaagagagctagcctcactggacctgcttctacttgaaatgtctccacag
ccagttaatgagaacaatgtcaactag
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