Polyodon spathula (Mississippi paddlefish): 121328841
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Entry
121328841 CDS
T07273
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein-like
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121328841
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121328841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
BAH
ELM2
GATA
Myb_DNA-binding
DUF7952
CCDC47
DUF7573
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
121328841
NCBI-ProteinID:
XP_041129871
LinkDB
All DBs
Position
16:13646094..13750890
Genome browser
AA seq
1526 aa
AA seq
DB search
MTADKEKDKEKEKDRDRDRDKRDKMRESENSRPRRSCTLEGGAKNYAESDHSEDEDNDNT
GATAEEASKKSKKKTQKKKSRYERMENGEITSFITEDDAVYRPGDCVYIESRRPNTPYFI
CSIQDFKLSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRNNENDSGRELVITDPIVKSRE
LFISDYVDTYHAAALRGKCNIAHFSDIFAAREFKARMDTFFYILGYNPETRRLNSTQGEI
RVGPSHQAKLPELLPFPSPDGQAVTENEELVWTPGVNDCDLLMYLRAARSMAAFAGMCDG
GSTEDGCLAASRDDTTLNALNTLHESKYDAGKALQRLVKKPVPKLIEKCWTEEEVKRFIK
GLRQYGKNFFRIRKELLPSKETGELITFYYYWKKTPEAASSRAHRRHRRQAVFRRIKTRT
ASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACRHCFTTTSKDWHHGGRENI
LLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEEEDGISGKHSMRTRRSRGSMSTLRS
GRKKQTASPDGRASPTIEDIRSSGRTSPSAASTSSNDSKADSMKKPSKKIKEEVPSPLKS
AKRQREKAASDTEETERVTGKKCKTQEINQPDSPSEGEGEGEGEGESSDSRSVNDDGSSD
PKDIDQDNRSSSPSIPSPRDNESDSDSSAQQQVLQAQHLVIQNPNGPPLPPQAPLLQIPA
STPSVLSAATASSQVSPSIPQPSIPPQPLSHSLIQPASQLHPQRLPSPHPPLQALTQALT
QMQALPQSQAPLQPQQTPLHAQMHSLPHPLQAQPHIQHPLQPQPFPTSSCSQSSQSQVPP
PLPSQPPTPGHTQQQPHPHTPPQALPQPPREQPLPPAPMAMPHIKPPPTTPIPQMPNPQS
HKHPPHLSAPPPFPAPSNLPPPPALKPLSSLSSLSTHHPPSAHPPPLQLMPQSQQLQLLP
AQPPVLTQSQNLPASTGHPSSTSHPVISQSPFPPHPFIPGGPPTMPLSSASTSATSTSSC
LPGMQPPPPSSISTPLPSTVSVPSSALSAVPPIQIKEEPMDETEEPESPPPPQRSPSPEP
TVVNTPSHASQSARFYKHLDRGYNSCGRTDFYFTPLAGSKLAKKREEALEKTKRDAEQKA
REEKEKEREKEREREREREREREAERAAKACSSSHDGRMGDSQMGGPHMRPSFEPPPTTI
AAVPPYIGPDTPALRTLSEYARPHVMSPTNRNHPFFVSLNPADPLLAYHMPGLYNADPGM
RERELREREMRDREIRERELRDRMKPGYEVKPPELEGLHPGANPMEHFARHGAITLPQMA
GHHPFAAFHHGLNPLERERLALAGPQLRPEMSYPDRLVAERLHAERMASVANDPIARLQM
FNVTPHHHQHSHIHSHLHLHQQDPLHQGSGGPVHPLDALGAGPHLARFPYPPGTIPNPLL
GQPPHEHEMLRHPVFGTPYHRDLTGALPPPMSAAHQLQAMHAQSAELQRLAMEQQWLHGH
HHMHGGPLPGQEDYYSRLKKESDKQL
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgacaaagagaaggataaagagaaagaaaaggacagagacagggacagagac
aagagagacaagatgagggagagcgagaactcccgtccacgccggagctgcactctggaa
ggcggagccaagaactacgctgagagcgatcacagcgaggacgaggacaatgacaacacc
ggggcgaccgctgaggaggccagcaaaaagtccaaaaagaagacccaaaaaaaaaaatcc
cgctacgaacgcatggaaaatggagaaatcacttccttcatcacggaagacgatgctgtt
tacagaccaggagattgtgtatatattgagagccgtcgacccaataccccatacttcatt
tgtagcattcaagatttcaaactgagtaaacgggaccatctccttatgaatgtgaaatgg
tactaccgccagtctgaggtaccagattcggtttaccaacacctggtccaggatcgaaac
aatgaaaacgattcaggtcgtgagcttgtcattactgaccccattgtcaagagcagagaa
cttttcatttccgattatgtggacacttaccatgctgctgcacttagagggaaatgtaat
attgcccatttttctgacatatttgctgccagagagtttaaggccagaatggacacgttc
ttttacattctgggatacaatccagagacaaggcggctaaacagtacgcagggagagatc
cgagtggggcccagccatcaggccaaacttccagaattgctgccctttccctcccctgat
ggccaggcagtgacagaaaatgaagagctggtgtggacgcctggggtgaatgactgtgac
ctgctcatgtaccttagggcagccaggagcatggcagcctttgcagggatgtgtgatggt
gggtctacagaagatggatgcctggctgcctctcgtgatgacactacacttaatgcacta
aacactctacacgagagtaagtatgatgcaggaaaggctctacagcgactggttaaaaaa
cctgtgcccaagcttattgaaaagtgctggactgaagaagaagtgaaacggttcataaaa
gggctgagacaatacggcaagaacttcttcaggatccgaaaggagcttcttcccagcaag
gagactggtgaattgatcactttttattactactggaagaaaactccagaagcagccagt
tcccgagcccaccgcagacacaggaggcaggctgtgttccgcagaatcaaaacccgcacg
gcgtccacacccgtgaacactccctccaggccaccgtccagcgagttcttggacctgagt
tcagcaagtgaggatgactttgacagtgaagacagcgagcaggagttgaagggatacgcc
tgtcgtcactgcttcacaaccacttccaaggactggcaccacggtgggagagagaatatc
ttgctgtgcacagactgtcgcattcactttaagaagtacggtgagctccctccgattgag
aagccagtggaccctccaccttttatgttcaaacccgtcaaagaggaagaggatggaatt
agtgggaaacatagcatgaggaccagaaggagtcgaggctcgatgtctacactacgtagt
gggcgtaagaagcagacagctagtcctgacggtcgagcctcgccaaccattgaagatatt
cgatccagcggccgaacatctcctagtgctgcaagtacttccagcaatgacagtaaggca
gactccatgaaaaaacccagcaagaagataaaagaagaagtaccttcacctctaaagagt
gccaaacgacaacgggaaaaggccgcttccgacacagaggaaactgaaagggttactgga
aagaaatgcaaaactcaggagattaaccagcccgactccccatcagaaggtgagggagaa
ggagaaggcgaaggggagagttcagacagccgcagtgttaatgatgacggaagcagtgat
ccaaaggacattgaccaggacaatcgcagctcctctccaagtattccaagcccaagggac
aatgagagcgactctgattcctcagctcagcagcaggtgttacaggcacagcatcttgtg
atccagaatccgaatggcccaccactgcctcctcaagcccctctccttcagatacctgcc
tcaacgccttcagtgttgagtgcagctacggcatcttcccaagtctccccatccatcccc
cagccttccatccccccacagcctctgtcacattctcttatccagcctgcttctcagctg
catcctcagaggctgccctcacctcacccgccactgcaggctttaactcaggcgttgact
cagatgcaagctctgccacagtctcaagcccctctccagcctcagcagactccacttcac
gctcagatgcattcactccctcatcctctacaggcccagcctcacatacagcacccactg
caacctcagccattccccacctcctcctgctcacagtcttctcagtctcaggttcctcct
ccacttccgtctcagccacccactccgggccacacccagcagcagccgcatcctcacact
cctcctcaagcactgccccagccccctagagagcagcccttgcctccagctcccatggcc
atgcctcatatcaaacctcctccaacaacgcccatccctcagatgcccaacccgcaatca
cacaaacacccaccccacctgtccgcaccgcctccattcccagcgccttccaatctgccc
cctccaccggcactgaagccactcagttccctcagttctctctctacccaccaccctcca
tccgcccacccaccgccgctccagcttatgccccagagccaacagctccagctcctgcct
gctcaacctccagtgcttactcagtcccaaaatctcccagcgtccacaggtcatccttcc
tctacatctcacccagttatttcccagtccccattccccccacaccctttcatcccggga
ggaccgcccaccatgcctctttcatcagcatcgacgtctgcaacgtcgacctcctcctgt
ctccctggtatgcagccgccacctccgtcttccatctcgacgcctctgccttccactgtg
agcgttcccagctcagcgttgtctgcggtccctcctattcaaatcaaagaggagcctatg
gatgagactgaagaacctgagagcccaccacctcctcagagaagcccttctccagaaccc
actgtggtcaacacaccaagccatgccagccagtcagcaaggttctacaagcatctcgac
cgtggttacaactcttgtgggagaacggatttctatttcacccccctggctggctcgaaa
cttgccaagaagagagaggaagcattggaaaagaccaagagggatgctgagcagaaagca
agagaagagaaagaaaaagagagagagaaggaaagagagagggaaagggagcgagaacga
gagagggaagctgaaagagcagcgaaagcatgcagctcatcccatgatgggcggatggga
gattctcagatgggtgggcctcacatgaggccttccttcgagcctcccccgacgaccatc
gctgccgtacctccatacatcgggccagacactccggccctgcgcaccctgagcgagtac
gctcgccctcacgtcatgtctcccaccaaccgcaatcaccccttcttcgtgtccttgaac
cctgcagaccccctgcttgcttaccacatgccaggcttgtacaacgcagacccaggcatg
agggagcgtgagctgcgggagcgcgagatgcgtgacagagagattcgggaaagggagttg
agggacaggatgaagcctggctacgaggttaagcccccggagttggaaggtttgcaccca
ggtgccaatcccatggagcattttgcaaggcatggagccattacccttccacaaatggca
ggacatcatcccttcgctgctttccatcacggtttaaaccccttggaaagggaaagactt
gcacttgctggcccgcagttgcggcctgaaatgagctacccagacagacttgtggccgaa
aggctgcatgctgaacgcatggcgtcggtagcaaatgacccaatagcaaggctgcaaatg
ttcaacgttaccccgcatcatcaccaacattcacacatccattcacacctacacctacat
cagcaagacccattgcatcaaggttctggcggtcctgtgcatcctcttgatgctctggga
gctggtcctcatttggcacggtttccctaccctcctgggaccattccaaacccactgctg
ggacaaccaccacacgaacatgaaatgctcagacaccctgtgttcggcaccccgtatcac
agagacctgaccggggctcttccacctcccatgtcggcagcacaccagctccaggctatg
catgcacagtccgcagagctgcagaggctggccatggagcagcagtggttacacggacat
caccacatgcatggagggcccctcccaggccaggaagattactacagccgactgaagaaa
gaaagcgacaagcagctgtag
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