Polyodon spathula (Mississippi paddlefish): 121328842
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Entry
121328842 CDS
T07273
Name
(RefSeq) AP-5 complex subunit beta-1-like
KO
K19022
AP-5 complex subunit beta-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121328842
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
121328842
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
DUF7582
Motif
Other DBs
NCBI-GeneID:
121328842
NCBI-ProteinID:
XP_041129872
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All DBs
Position
16:17944801..17952362
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AA seq
933 aa
AA seq
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MAAPNPEGWPQRVAAFSWSPSYFLSSTTPEDFLSDLLQDLKDDKVGESTKVLMLGPLQEH
PTILCPSQQVGEQTAATLLGVFSQMAHRPKFVNLKCHLMLSIATVLISTSVVKQGVKVAE
GFLDLLFQTAQDTNDQKHGGMFRPLRAMACDCLREMETCCPGLLSSKLEALYSLKQQEIT
PLHQAYTLLYGVALRNAVHCLTLQKDVMDGDLKKLLASNEGFAWKATEKLLELVPLTTMS
RIPILPSNVETKELKSVVSLLLEECYLLTPVTQATLLRELTQVVSMVQSLSPVIFKSQLL
RLFGTVEISLLHSTLLMKGTFTDSLFTAEDENFLLKRLVGMAQHPLLSTPQKLFYIECIL
HFPENRPISSNGEESLPVLVTPRMAACLFPTVFNDSRTMLSRLNILSLAYLEADEEEGID
YIFGHLMALHKIVDHHGTREMTTTFFRAVYIFMQNFYLNERYTRDLIESLSELYRRHYTL
APNLINLVDSTQKLLEDSSWPTDLLKALQMLIVELPLQQLIHQSLYWHLKVLGRVAKEEQ
ASQRSTVRFLLNLLINSSLCGLGDWRIGNALLSVCRNLLQHPNLDQVFIELADLLQFMMH
SFEDVDIQDHARFYYTLLTNLSKEKLSGVLNMGTVGSQAKIRSLSSIMAESEELSSCLTV
HRTRQPVLKLVKLSEDGISKPVHSNSGPEDSAPDVDLLKVYQNQFLNPEFASVIILKYHL
TFAGEVDALYHKLFCICLHFEQTDSNYERVSDVSVPCLIYDRKPCVVSFTLKPWRPYPTV
LHASAIFITEDGLSWHTQLDPIPIGFPDLFLPLPVPVHWSQGSREQLFHQLWKSLCPEES
SPSATSLFCFEVGERSLREVIESSFHQYLVSKEASPESYKVLLFLPPQFYVLLKIENSED
AASVSIITDNWKLLPFINSYIKCITDYSADSTQ
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaccaaatcctgaaggctggccccagagagtagcagcgttctcatggagcccc
agctatttcctctccagcaccactccggaggacttcctgtctgacctgctccaggacctc
aaggatgacaaggttggcgagagcacaaaggtattaatgctaggcccactgcaggagcat
ccaactatcctgtgcccatcccagcaagtgggagagcagacagcagccactttactgggc
gtgttctctcaaatggctcacagacccaaatttgtgaatctcaagtgccacctgatgcta
tccatcgccactgtgttaatatccacctctgttgtgaagcaaggggttaaagtcgctgag
ggctttctagatctcttgtttcagacagcacaggatacaaatgatcaaaagcatggtggg
atgtttagacccttaagagccatggcgtgtgattgccttagagaaatggaaacctgctgc
ccagggctgctttccagtaagctggaggctctttattccctgaagcagcaggagattaca
cctttgcaccaagcatacaccctcctgtatggagtagccctaaggaacgcggtgcattgc
ctgactttgcagaaagatgtgatggacggagatctaaagaagcttttagcaagcaatgaa
gggtttgcctggaaggcaacagaaaaactactggagctggttccattgacaacaatgagt
cggatccctattcttccttccaatgtggaaaccaaagagttgaaatcagttgtttccttg
ctcttagaggagtgctatctgctcaccccagtgacacaggccactttgcttcgggaacta
actcaggtggtctccatggtccagtctttgtctccggtcatcttcaagtctcagcttctt
cgtctctttgggaccgtggagatctcccttctgcactccacgttgcttatgaaagggacc
ttcacagacagcctcttcacagccgaggatgagaactttcttctgaagcggctggtgggc
atggcccaacacccactgctgtccaccccacagaagctcttttatattgaatgtatcctc
cacttcccagagaaccgtcctatctcctccaacggggaggagagcttgcctgtgttggtg
acccctcgaatggctgcctgccttttccccaccgtctttaatgacagcaggaccatgctg
tctcgcttaaacatcctcagtctggcctacctagaagctgacgaagaggaaggaatcgac
tacatctttggccacctgatggctctccataaaattgttgaccaccatggcaccagagaa
atgaccaccacctttttcagagcagtctacatctttatgcagaatttctacctcaatgaa
aggtacacaagagacttgatagaaagtctttctgagctctaccgaaggcactacacctta
gcccctaacctgatcaacctggtggactctacccagaagcttttggaggactccagctgg
cccactgacttgctcaaggccctacagatgttgattgttgagctccctctacagcagttg
atccaccaaagcctgtactggcacctgaaggttttaggcagggtggccaaagaggaacag
gcttctcagaggagcactgtgcgcttcctgctcaatctcctcattaactccagtctttgt
ggattgggagactggcggattggtaatgctcttctctcagtttgccgaaacttgcttcag
caccctaacctggatcaggtctttatcgagttggcagaccttcttcaattcatgatgcac
agcttcgaggatgtagacatccaagatcatgctcgcttctattacaccctgctgacaaac
ctttccaaggagaagctctcaggggttctgaatatgggaacagttggaagtcaagcaaaa
atcaggtccttgtcatctatcatggctgaaagtgaagagctgtccagctgtttaactgtc
catagaaccaggcagccagtgctgaagcttgtcaaactttctgaagatggtattagtaaa
cctgttcattcgaacagtggaccagaggacagtgctcctgatgtagacctattgaaggtt
tatcaaaaccagttcttgaaccctgaatttgcctctgtgataattttgaaatatcatcta
acctttgcaggtgaagttgatgcactataccataaactgttttgtatatgtttgcatttt
gagcagacagactctaattacgagcgagttagcgatgtcagtgtgccgtgcctcatctac
gacaggaagccttgtgtggtttccttcactctcaagccttggaggccctatcccacagtt
cttcacgccagtgcaatatttatcacggaggatggtctttcttggcacacccagctggat
ccgattcctataggcttcccagacttgttcctgcccctccctgtgcctgtccactggtct
cagggttccagagagcagctctttcaccaactctggaaatctctgtgtccagaagagtcc
agcccgtctgccacaagcttgttctgctttgaagtaggcgagaggtctctgagggaggtg
attgagtccagctttcatcaatacctggtttctaaggaagcgagtcctgaatcttacaag
gttctgctattcctaccccctcagttttatgttttgctgaagatcgaaaattcagaagat
gcagccagtgtcagtatcataactgacaactggaagcttttgccttttataaactcctac
attaagtgcatcacagattatagtgctgacagtacacaataa
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