Polyodon spathula (Mississippi paddlefish): 121328856
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Entry
121328856 CDS
T07273
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4-like
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121328856
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121328856
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121328856
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121328856
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121328856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Motif
Other DBs
NCBI-GeneID:
121328856
NCBI-ProteinID:
XP_041129915
LinkDB
All DBs
Position
16:complement(30030592..30050258)
Genome browser
AA seq
1042 aa
AA seq
DB search
MAEGGGSEPGSGAELDSELVPVQAPIPASDIQKQTLGALLKTQLRKGDKWFLIDSRWFKQ
WKKYVGFDSWDMYSVGEQTLYPGPIDNSGLFSDPEKQTLKEHLIDELDYVLVPTEAWHKL
VSWYGCVEGQQPIVRKVVEHGMFVKHCKVEVYLLELNLCENDNMDDLVKRHFSKADTIDT
IEKDMRALFNISADKEIRLWNKYMSNTYEQLNKPDSTVQDAGLFQGQVLVIEKKNEDGTW
PRQASYTKSSTTTSRNLTTSSKLPSNCTATISSTITNGDSNNSSYTLNNSTSSNNRLGGY
SSYGSSYSYREPQTQPGLCGLSNLGNTCFMNSALQCLSNAAPLTEYFLQDEYEAEINREN
PLGMRGEIAEAYADLVKQMWSGRCSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLD
GLHEDLNRVKKKPYLALKDAEGRPDEIVAKEAWTNHRLRNDSIIVDTVHGLFKSTLVCPE
CAMVSVTFDPFCYLTLPLPMKKDRTMEVFLVRADPQSRPVQYRVVVPKLGTVADLCTALS
KLSGVLADNMVVVDVYNHRFHKIYRHDEGLNHIMDRDDIFLYEVEELEGEQVSLPIYFRE
RRMKHTGSSTGTVLFGQPLLISFPKQNLTVDLLYERVLERIGRYVKRPQVTGCEGKATAA
AGSSSASGRSSTSSSCSSPTSQTVESTGCPSQAAELGLCGCEPPEAPSCSGGPTETASGS
RQPSQAGTSNGPNGVCEGEDEEMEHQEVARPNQDILIEPGNGQSEGSDREEDCEDPENES
IAGFKKTSAKSANCPAKLFTFSMVNSYGTAEISSLTSDNTILKLNAQSTVAIDWDSESKT
LYYDDQEAEAYEKHESMLQHQKKKATVALRDCIELFTTMETLGEHDPWYCPTCKKHQQAT
KKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVVDFPVRDLNMSEFVCDPKAGPYIYDLIA
VSNHYGGMGGGHYTAYAKNKADEKWYYFDDSSVSSASEDQIVTKAAYVLFYQRRDNKSIQ
SMPSSASVGKAPEEGEDRMDTN
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggaggcggatctgaaccaggtagcggggccgagctcgactccgaactggta
cctgtacaggcacctatacctgcttccgacatccaaaaacaaaccttgggagccttgctt
aaaactcagctccgcaagggcgacaaatggtttctgattgatagtcgctggtttaagcaa
tggaagaagtatgtgggcttcgacagctgggacatgtacagtgtgggggagcaaaccctg
tatcctgggcccattgataattcggggctattctcagacccagagaagcagactctgaaa
gaacacctaattgatgagctagactatgttctggtacctactgaggcctggcacaagctc
gtgagctggtatggctgtgtggaaggacagcaacccattgtcagaaaggtggtagagcac
gggatgtttgtaaagcactgtaaagtggaagtctatcttctggagctcaatctctgtgag
aacgacaacatggatgacttggtgaaacgacatttcagcaaggctgataccatagacaca
attgaaaaggatatgagggcattgttcaatatctctgctgacaaagagatccggctgtgg
aacaagtatatgagcaacacttacgaacaactgaacaagccggatagtactgtgcaggac
gctgggctctttcagggacaggtgcttgtgatagaaaaaaagaatgaagatggcacatgg
cctaggcaagcaagctacacaaaatccagcacgaccacctccaggaatttaactacctcc
tcgaagcttccgtccaactgtactgccaccatctcctctaccataactaatggagacagt
aataactcaagctacacactgaacaacagcaccagctccaataacaggttgggtgggtac
agttcctatggctcatcatacagctaccgagaaccccagacacagcctggcctctgtggg
ctcagcaacctgggcaacacctgcttcatgaactctgctttgcagtgcctgagtaatgca
gcccccctgacagaatattttctccaggatgagtacgaggcagagataaaccgggagaac
cccctgggaatgcgaggcgagatcgctgaagcctatgcagacctggtcaagcagatgtgg
tctgggcgctgcagctatgtagcacccagaacattcaagacccaggtgggccgctttgcc
ccccagttttcaggataccagcagcaggactcccaagagctgttggcctttctgctggac
gggcttcatgaagacctcaaccgtgtcaaaaagaagccctacttggcactgaaggatgct
gagggaaggccagacgagatagtggcaaaggaagcctggacaaatcaccggcttcgtaat
gactccatcattgtggacaccgttcacggactcttcaagtccactctagtgtgtcctgag
tgcgccatggtctcggtcacctttgaccctttctgctacctcacgctgccactgcccatg
aagaaagaccgcaccatggaggtgttcttggtgcgcgcagacccccagtccaggcccgtg
cagtacagggtagtggtccccaagctgggcactgtggctgatctatgcaccgctctgtca
aaactgtctggcgtgctagctgacaacatggtggtagtagatgtgtacaatcaccggttc
cataaaatctaccgccacgacgagggactgaatcacatcatggacagagacgatatcttt
ttgtatgaggttgaggagttggaaggggagcaagtcagcctgcctatatactttagggag
cggcgtatgaagcacacaggctcctccacaggcactgtcctgtttgggcaaccccttctc
atctcgttccccaagcagaacctcactgtggacttgctgtatgaaagggtgctggagaga
attggccgctatgtgaaaaggccgcaggtcacaggctgcgaggggaaagccactgcagca
gctggcagtagcagtgcaagtggacggagcagcactagcagtagctgcagcagccccact
agccagactgtagagtcaacagggtgtcccagccaggcagcagagctgggattgtgtggt
tgtgaaccaccagaggcaccatcgtgcagtgggggacccacagagacagctagcggcagc
agacaaccttcccaggcagggaccagcaacggaccgaacggggtgtgtgaaggagaggat
gaggagatggaacatcaggaggtagcgaggcccaaccaagatatcctcatagaacctggt
aacggccaatcggagggctctgacagggaagaggattgcgaggacccagaaaatgagtct
atcgctggcttcaaaaaaacttcagccaagtcggctaactgtccggcaaagctgttcact
ttcagtatggtaaactcttacggcacagctgaaatcagctcacttaccagcgataacaca
atcctcaaactcaatgcgcaatcaacagttgcgattgactgggactccgaatctaagacg
ttatactatgacgaccaggaggcagaggcttatgagaaacatgagagcatgttgcagcac
cagaagaagaaggcaacagtggccctgagagactgtatcgagctctttaccaccatggag
acgctaggagaacatgacccctggtattgccccacctgcaagaagcaccaacaggccaca
aaaaaatttgatctgtggtcccttccacgtattctggtcgtccatctgaaacgtttctct
tataaccgctgctggagagacaagctggatactgtggtagacttcccagttagggacctg
aacatgtctgagtttgtctgtgacccaaaggcagggccctacatatatgacctcatcgct
gtttccaaccattatggagggatgggtggtgggcattacaccgcctatgccaagaacaag
gctgatgagaaatggtattactttgatgacagtagtgtctcctctgcctcagaggatcag
attgtgacaaaggcagcatacgtgctgttttaccagcgtcgggataacaagtcaatccag
agcatgccttcctcagcctctgtgggcaaagctccagaggagggggaagacagaatggac
accaactga
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