Polyodon spathula (Mississippi paddlefish): 121328908
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Entry
121328908 CDS
T07273
Name
(RefSeq) zinc finger and BTB domain-containing protein 40-like isoform X1
KO
K10512
zinc finger and BTB domain-containing protein 40
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121328908
04121 Ubiquitin system [BR:
pspa04121
]
121328908
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121328908
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121328908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
BTB
zf-C2H2_6
zf-C2H2_7th_ZNF462
zf-C2H2_jaz
HSR
Zf-C2H2_ZNF451_C
DUF7565
zf-C2H2_8
AKAP95
C1_1
zf-C2H2_3rep
zf-C2H2_FBX41
zf-met
zf-H2C2_5
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
121328908
NCBI-ProteinID:
XP_041129982
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All DBs
Position
16:complement(18504280..18527745)
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AA seq
1196 aa
AA seq
DB search
MELPNYSRQLMQQLYTLRKEGQFCDCTILLGVTPYRAHKLVLAASSLLFKSLLENSETIS
IDPSVATSDEFANLLEMIYTGKLPPGKHNFTKVISIADSLQMFDVAVSCKNILNSLLKRS
TCEQAESSRDASCTEPAPDHTRDNQALVPAAVTTHESKKDAPELSTTLNLKEAQEDAPLL
EEVHQQLSEIGDLERSTKPIFSAEVKDDLTEESGIQDPSGGSHENSPPRKRCRLALSDGS
EDDVEVLVQSKSRIAEAIKDAQPLVHLVETSESLSSSEKQIILDCCKEDQGVPNVFDRLL
NKVTDEKSLPVDTLLSVLDLLRESYPELNNVLQTRSLREDSLAGAAPEDRAFFDLLLAHV
DELGDSVTELSPITECMETATEGFLTELEKETVLECCKGVSPKEAIANLLNKVTTEKSVD
QISLLKLLHAVKEAFPNLQLLLERLEAEWAQRGGTEEKSLEEYGAELLRKYHESLCEILS
EPHPLTDSLAAAGDIPTEEREFVKKMLEEDKDPGSFGRMISVVLEERSIQTLSVWRMLLR
AQREVPLLALLIEEIRRDPDADKLIQSVFDKESRALDILFRHKELVTEAIDDLGVLLACV
AQGVECPTGEAIEIIRNCCKKEGPKESVTSLLSKILEEKSISALPFCKLLCIIRESFPSL
MPLVEELERAETETEEYAKGKLKKRSGAEMEVMLDEESSPSELKEETQKRSSKQGFTCKW
CDKSFEFKCRMEVHLKRCRLASQAPVECPECGETMSSLRALQLHTSQSHGDAPRKKRKQG
AVTCDICGKSFAHQSGMLYHKRADHFDEKPYSCDQCGAKFAANSTLKNHKRLHTGERPFF
CKHCDMMFTQAAALAYHTKKKHSEGKMYACQYCDNVFAQSIELTRHVRTHTGDKPYVCRE
CGKGFSQANGLSVHLHTFHNIEDPYDCQKCRMSFPTLDEHKKHIQVVHPREYYPCETCSK
VFSASSVLERHMVTHVGGKPYKCEICNKAYQQLSGLWYHNRTHHPDIFAAQNHRSSKFAS
FPCSSCDKSFPNITSLKRHMKADHADAELYECQSCKEVFTTLGLLKKHTTTKHTGTLQNQ
VSTEHFSHDGEAFQCGHCDLLLPSQQSLEQHFQTQHPGAGLVQAPAIAAQMVIQASEQTE
VSEELIALEEAQLGRSQVYVALADSQNNASGSEIVAVSMEDLLDGTVTLICGAEAQ
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcccaactacagcaggcagctgatgcagcagctttacactttaaggaaggaa
ggccagttctgtgactgcaccattctcctaggagtcaccccctacagagcccacaagcta
gtcctggctgcctccagcttactcttcaaatcactacttgagaactcggagacgatttcc
atagatccttctgttgccacctcagatgagtttgctaacctgctagagatgatctacaca
ggcaagctgccccctggcaagcacaactttaccaaagtcatctccatcgcagacagcctg
cagatgttcgatgtggcggtgagctgcaagaatatcctaaacagtctattaaaaagatcc
acatgtgaacaagcagagtccagcagagatgctagctgcacagaacctgcaccagatcat
accagggacaaccaggctttggtacctgctgcagtaaccacacatgagtccaagaaagat
gcccctgagctctccaccactttgaacttaaaagaagcgcaggaagacgcaccccttttg
gaagaagttcatcagcagctgagtgaaatcggggatctggaacggtctacaaagcctata
ttctctgcagaagttaaagacgatctgactgaggagagtggcattcaggacccttcagga
ggcagccatgaaaattctccacctcggaagagatgtcgattagcattatctgacgggtct
gaagatgatgtagaggttttggtgcagagcaagagtcgaattgctgaagcgattaaagat
gcacagccactcgttcatttagttgagaccagcgagtcactttcaagctcagagaaacag
attattttagattgctgtaaagaagatcaaggtgttccaaacgtttttgaccggttactc
aacaaagtcactgatgagaagagtctccctgtggataccctgttatcagtactagacctc
ttaagagagtcctacccagagctaaacaatgtgcttcagactagaagtctaagagaagac
agcttagcaggtgctgctccagaggacagagcgttctttgacttgcttcttgctcatgtc
gatgagctgggggacagtgtgactgagctgagccccatcactgagtgcatggaaacggca
acggaaggatttctaacagaactggagaaggagactgttcttgaatgctgtaaaggagtg
tcccccaaggaagccattgcaaatcttttaaacaaggtgacgacagagaagagtgtagat
cagatcagcctgttgaaactgctccacgcagttaaagaggccttccccaacctgcagctg
ctattggagagacttgaagcagagtgggcacagcgtgggggaacagaagagaagagccta
gaggaatatggagcagagctcttgaggaaataccatgaaagcctctgtgagatactgagt
gagccccatcctctcactgacagcctagcagcagctggagatatccctacagaggaaaga
gagtttgtgaagaagatgctggaggaggataaggaccctggcagctttggccggatgatc
tctgtggttctggaggagcgcagcatacagaccctgtcagtgtggaggatgctgctcaga
gcacagagagaggttccacttctagctttactgatagaggagattaggagggacccggac
gcggataagctcatccaatcagtctttgacaaggaaagcagagcattggatattttattc
agacataaggagttggtcacagaggcgattgatgaccttggcgtgttattagcctgtgta
gcacagggtgtggagtgtccaacgggggaagccattgagattataagaaactgttgcaag
aaagaaggtccaaaggagtcagtaactagtcttttaagtaaaatacttgaagaaaaatca
atttctgctcttccgttttgcaagctgctgtgcatcatcagagagtcctttcccagtctc
atgccactggttgaagagttggagcgagcagaaacagaaactgaagaatatgcaaaaggg
aagctaaagaagcgaagcggcgcagagatggaggtgatgctggatgaagagagcagcccc
tccgagctgaaggaggagacgcagaagaggagcagcaagcaaggcttcacctgcaagtgg
tgtgacaagagctttgagttcaagtgcaggatggaggtacatctgaagcgctgccgcctg
gcctctcaggctccggtggagtgcccggagtgcggggagaccatgtcctctttgagagcc
ctgcagctgcacacctcgcagtcccacggagacgcccccaggaagaagaggaagcagggg
gccgtgacctgcgacatctgtggcaaaagctttgcacatcagtcaggcatgctttaccac
aagcgcgcagaccactttgatgagaagccctattcctgtgatcagtgtggggcaaagttt
gctgccaactctaccctgaagaaccacaagagactgcatactggagagaggcccttcttc
tgcaagcactgtgacatgatgttcacacaggctgcggcgcttgcttaccacaccaagaaa
aagcactctgaaggtaagatgtatgcctgccagtactgtgacaatgtgtttgcccagtcc
atcgagctcacccgccacgtgaggacgcatacgggagacaagccgtacgtgtgcagggag
tgcgggaaagggttcagccaagccaacggcttgtccgtccatctgcacaccttccacaat
atcgaggacccctatgactgccagaagtgccgtatgagtttccccaccctggatgagcac
aagaagcacatccaggtggtccatcctcgggaatactacccctgtgagacctgctccaaa
gtcttcagcgcctcttctgtgttggagagacacatggtcacccatgtgggagggaagcct
tacaaatgcgaaatctgcaacaaagcatatcagcaactctcaggactgtggtatcacaac
cgcacccatcatcctgatatatttgctgcgcagaatcatcgctcttcaaagtttgcttct
ttcccgtgctcctcttgtgacaaatcatttcccaacataacatctctcaaaagacacatg
aaagcagatcatgcagatgcagagctttatgagtgccagagctgtaaagaggtcttcact
acattggggctactgaagaagcacaccacaaccaaacacacaggcacactgcagaaccaa
gtcagcactgagcatttcagccacgatggggaggccttccagtgtggccactgtgacctt
ctcctcccctcccagcagtccctggaacagcacttccaaacccagcacccaggggcagga
ctggtccaggctccagccattgcagcacagatggttatccaggcatctgaacagacggag
gtgtccgaggagctgattgccctggaagaggctcagcttggcagatcacaagtgtacgtt
gccctggcagattcccagaacaatgcgtccggatcggagatcgtcgctgtcagcatggag
gacttgctggatggaacagtgactctaatctgcggagcagaagctcagtga
DBGET
integrated database retrieval system
