KEGG   Polyodon spathula (Mississippi paddlefish): 121328936
Entry
121328936         CDS       T07273                                 
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1-like isoform X1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00310  Lysine degradation
pspa01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    121328936
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pspa04147]
    121328936
Enzymes [BR:pspa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     121328936
Exosome [BR:pspa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   121328936
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3 PAP_RNA-bind
Other DBs
NCBI-GeneID: 121328936
NCBI-ProteinID: XP_041130016
LinkDB
Position
16:11519954..11533929
AA seq 734 aa
MQTEALVRILSGIWISVLLLEVNCTQQNPIPEENLLVLTVATKETDGFTRFMRSAKLFNY
TVKVLGRGEKWRGGNYKTASGGGQKIRLLKSALEKYEKEDQVILFIDSYDVVFASGPKEL
LKKFQQASHRVVFSAESLVWPDRYLEDKYPHVREGQRFLSSGGFMGYAPSLKKMVADWNG
KDDESDQLFFTQLYLNPEKREKINITLDNKCRIFQNLYGSLDDVVLKFEDGRVRARNVVY
DTLPVIVHGNGANKLQLNYLGNYIPKVWTFETGCTECDEDLRSLSALKESEYPLVLIGVF
IHQPTPFVAVFFERLLNLKYPKDRLQLFIYNHESHHERNVKLFVEAHGSEYRAVKVIGLE
EGLDNAGSRNLGLDLCRQDAECDYYFSVDVEVVLKNADMLKILIEQNRSITAPMISRNGK
LWSNFWGALSADGFYARSEDYVDIVQGRRVGIWNVPYISSVYLIKGSVLRTELTDKDLFH
SLTLDPDMAFCSNVREQGVFMFVSNRHEFGRILSTENCVTTHLHNDLWQIFENPQDWEER
YIHSNYTRIMKDKLIETPCPDVYWFPIFTETGCDHLVEEMEHFGQWSGGGNEDSRIQGGY
ENVPTIDIHMNQVELEKQWQKFLLEYIAPITEKMYPGYYTKCTSYLNFVVRYKPDEQPLL
APHHDASTFTINIALNSKDTDYEGGGCRFIRYNCSIQAPRKGWALMHPGRLTHYHEGLPT
TAGTRYIAVSFVDP
NT seq 2205 nt   +upstreamnt  +downstreamnt
atgcagaccgaggccttggtacgaatactgtctgggatctggatctcagttttgctcctt
gaagttaactgtacccaacagaatccaatccccgaagaaaatcttttagttttgactgtg
gccaccaaagagacagatggattcacacgtttcatgagatcagccaaactcttcaactat
accgttaaggtgctgggcagaggggagaaatggagaggagggaactacaagactgcttca
gggggtggtcagaaaatccgtctcctgaagtctgcactggagaagtacgagaaggaagat
caagtgatcttgttcattgacagctacgacgtggtcttcgcatcaggtcccaaagagctg
ctgaaaaagttccagcaagccagccacagggtggtcttctctgcagagagcctcgtatgg
ccagatcggtacctggaggacaagtacccccacgtccgggagggccagagattcctcagc
tcaggaggtttcatgggctatgcacccagcctgaagaagatggttgcagattggaatgga
aaagacgatgaaagcgaccagctgtttttcacacagctttacctaaatccagagaaaagg
gaaaagatcaatattactttggataataagtgcagaatatttcagaatctctatggatct
ttagatgacgttgtgctgaagtttgaggacgggcgggtccgtgctaggaatgtggtttat
gacactttaccagttatagttcatggcaacggagctaacaagctgcagctaaactacctg
ggcaactacatccccaaagtgtggacgtttgaaacgggctgcactgagtgtgatgaggac
ttaaggagtctgtcggctctcaaggagagcgagtaccccttggtgttgattggagttttc
atccatcagcccactccgttcgtcgctgtgttttttgagcgtctgctcaacctcaagtac
cccaaggaccggcttcagctcttcatttacaaccacgagtcccatcacgagcgcaacgtc
aagttgttcgttgaggctcacgggagcgagtatcgagctgtgaaagtgatcggactggag
gaggggctggacaacgcagggtcgaggaatctgggattggatctgtgccggcaggacgca
gaatgcgattattacttcagcgtggatgtggaggtcgtcttgaaaaatgctgacatgctc
aaaatcctcattgaacaaaacaggtccataactgcccccatgatcagtcgcaatggaaag
ctgtggtccaatttctggggggccctgagtgctgacgggttctacgccaggtccgaggat
tacgtggacatcgttcaggggaggagggttggtatctggaatgttccctacatttccagt
gtctacctgattaaaggcagcgtcctgaggactgaactgacagataaagatctgttccac
tctctcacactagaccctgacatggccttctgcagcaatgtccgggaacagggagtgttc
atgtttgtttccaacaggcatgaattcggacgcattctctccactgaaaactgtgtgacg
actcacctgcacaatgatctgtggcagatctttgaaaacccacaggattgggaagaacga
tacatccattcaaactacacccgaatcatgaaagacaaattaatagaaacgccatgccct
gatgtctactggtttcctattttcactgaaaccggctgtgatcatctggttgaggaaatg
gaacattttggacagtggtctggaggcggcaatgaggactctagaattcaagggggctat
gagaacgttccgaccatagacattcacatgaatcaggtggagcttgagaagcagtggcaa
aagttcttgcttgaatacattgcaccaattacagagaaaatgtaccccggatactacacc
aagtgtacctcttacctgaactttgtggtgaggtacaaacctgacgagcagccgctgctc
gcaccccaccatgacgcctctacttttacaattaacatagctctcaacagcaaagacact
gactacgagggagggggctgccgtttcatcaggtataactgctctatccaggctcctcga
aaagggtgggcgctcatgcacccaggacgcctaacccactaccacgagggcctccccaca
accgcgggcacacgatacatcgcggtgtcgttcgtcgacccttaa

DBGET integrated database retrieval system