Polyodon spathula (Mississippi paddlefish): 121328980
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Entry
121328980 CDS
T07273
Name
(RefSeq) neural cell adhesion molecule L1-like
KO
K06550
L1 cell adhesion molecule
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121328980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121328980
04090 CD molecules [BR:
pspa04090
]
121328980
04091 Lectins [BR:
pspa04091
]
121328980
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
L1 family
121328980
CD molecules [BR:
pspa04090
]
Proteins
121328980
Lectins [BR:
pspa04091
]
I-type lectins (Siglecs)
121328980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
Ig_6
Interfer-bind
Uroplakin_II
DUF4719
Motif
Other DBs
NCBI-GeneID:
121328980
NCBI-ProteinID:
XP_041130073
LinkDB
All DBs
Position
16:complement(21095685..21168595)
Genome browser
AA seq
1294 aa
AA seq
DB search
MKDYKELGGGGPRIWALVLLQVLVLCVSRTQAALQIPLDYKQENLMTPPVITEQSPRTLI
VYSSDEIILKCEATGQPQPTIRWTKDGQFFDPKADPHIVTCAGSGTFSIVSNGNSGSSFR
KYHGDYRCYAANELGTAVSAETRLITESPPKWQKETITPFEAEVGESVVLPCNPPVSTTT
PRIYWMDMSLKHITQSPRVTQGRSGSLYFSNVEKSDTKNDYMCHAHFIGARTIVQKEPIE
LRVRDSNSVKNRRPHLLMPQGERSSYLALRGHSLELECIAEGLPTPEIAWMRREGVMPEG
RVILENFNKLLRIENITESDDGEYQCTVSNEEGRERHIYTVSVEAAPYWVRQPESGVYGP
GETVRLDCDVAGKPKPSVVWKINGEPLTDTDSDLSHSVKGSSLILHSVQSRDTSVFQCEA
NNTHGTILANAYVYVITLPAQILSPDDQLYIVAEDQAAFLDCRNFGAPRPDVTWSRDGKD
SFSILEDPRFSLYTNGTLHIISASREDSGQFICTANPESDNISISATLEIRNKTVILVPP
RDQRVPRGRTAEFSCKARYDSRHFQSKQPDPMWRRDGNKIAETADSSKYVFDGHKLVIDE
VEEQDQGVYTCIAASPIDSDEASGRLLVLDVPDPPIDLVLSDPQDRSVVLSWTPANDHNS
PILEYVIEYSTMLNQGVWSELTRVNESQTSALLDLFPFLKYRFQVIAVNELGNSRASQPS
DSLETPAAAPDSNPTGVRGEGNQTDNMIIHWEPIRQLQWCGPGFKYQVLWRQAGESEWHE
AYTESPVFVVTGSPPFTPYHIRVRAVNERGPGPEPDTVTGYSGEDLPLSSPLNVAVEFLT
RTLVNVTWSPVPRESVRGHLKGYKVHCWRSRTLQERPKRHASDRFSLSVAGGQSHALLSG
LQPFSIYYLEVSVFNGRGEGPASEPLRFDTPEGVPGPPASLTLDSPSESLLILQWQPPLQ
PNGNLIGYDLHYQQINESGNSHLTDVEFKPHELNWTVLEVDPRSLYRFYLKARTSAGAGP
HIFVEGSALLEGALPKLENISMVSGKTYSNISWVPQEGYRGVEFQIQYLNKHRSNSPWQV
LEKVSSTQSFYQIQNLEPGTSYRVRFTVKNRTAEVSFWEHSIQTAGPVLSELHGGFATQG
WFIGLISAVVLLLLILLIGCFIKRSRGGKYSVKDKEEGQVDSEARPMKDETFGEYRSLES
ENEEKPDSGSQTSIIADLKPLGSDDSLAGYGGSVDVQFNEDGSFIGQYSGKKEPSTAAGQ
GSSGPASPVNPPPTAGPLEFQPLASGSRGGGHNF
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgaaggattataaggagctgggagggggaggcccgcggatctgggcactggttctgctg
caggttctggtcctgtgtgtgagtcggacccaggctgcccttcaaatacccctggactac
aaacaggagaacttgatgaccccccctgtgatcacagagcagtctcctaggactctcata
gtctactccagcgatgagatcatactgaagtgtgaggctactggacaaccacagcccacg
attcgctggacgaaggatggtcagttctttgaccccaaggctgacccccacatcgtgacc
tgcgctggttccggaaccttctccattgtctccaacggcaacagtggctcatccttccga
aagtaccatggggactaccgctgctacgcagccaacgagcttggaaccgctgtgtctgcg
gagaccagactcatcactgagagccccccgaagtggcagaaggagacgatcaccccgttc
gaggcagaggtaggggagagcgtggtgctcccctgcaaccccccggtcagcacgacaacc
cccagaatctactggatggacatgagtctgaagcacatcacacagagtccgcgggtgact
cagggtcgcagcgggagcctgtacttctccaacgtggagaagagcgacaccaagaacgac
tacatgtgtcacgcgcacttcatcggagcgcgcaccatcgtgcagaaagagcccatcgag
ctgcgcgtgcgagactcgaactcggtgaagaaccgcaggccccatctccttatgcctcaa
ggagagaggagttcgtatctggcattgagaggacacagcctggagctggagtgcatcgca
gaggggctcccgacccctgagatagcctggatgcggagggagggggtgatgccggagggg
agagtgatcctggagaatttcaacaagctgctgagaatcgagaacatcaccgagtcggac
gatggagagtaccagtgtactgtgagcaatgaggagggtagagagagacacatctacacc
gtctctgtggaggcggccccatactgggtgaggcagccggagagtggggtgtacgggccg
ggcgagacagtgcggctggactgtgacgtggcagggaaacccaaacccagcgtggtctgg
aagatcaacggggagcccctgacagacacagactcagatctcagtcacagtgtgaagggc
agttctctgattctccacagcgtgcagtcgagagacacgagtgtgttccagtgtgaggcg
aacaacactcatgggaccatcctcgctaatgcctacgtctacgtcatcaccctccccgct
cagatcctctctcccgatgatcagctgtacatcgtggctgaagatcaggctgccttcctg
gactgcaggaactttggagcgccgaggccagatgtgacctggtcccgcgatggtaaagac
tcgttctccatcttggaggacccgcgcttctccctctacactaacgggaccttgcacatc
atctctgcctctcgagaggacagcgggcagttcatctgcaccgcgaaccccgagtcagac
aacatctctatcagcgccaccctggagatccgcaataagacggtgatcctggtcccgcct
cgtgatcagagggtgccccgaggacgcacggccgagttcagctgtaaagcgcggtacgac
agccgccacttccagtccaagcagccagaccccatgtggaggagagacggaaacaagatc
gcagagacagccgacagcagcaagtacgtgtttgacggtcacaagctggttatcgatgag
gtggaggagcaggatcagggtgtgtacacctgcatcgcagcctcccccatcgactccgat
gaggccagtggcagactcctggtcctggatgttccggaccccccaatcgacctcgtgctc
tcggacccccaggatcgcagcgttgttctgtcctggacccccgccaacgaccacaacagc
cccatactggagtatgtgatcgagtactcgacgatgctcaatcagggtgtgtggagtgag
ctgacgagagtgaacgagagccagacttccgcgttgctcgacctcttccccttcctgaag
taccggttccaggtcatcgctgtcaacgaactgggaaacagcagagccagccagccgtcg
gactctctcgaaacacctgccgcagctccagacagtaacccaactggagtgagaggagag
gggaaccagactgataacatgatcatccactgggagcccatcaggcagctgcagtggtgt
ggacctgggttcaagtaccaggttttgtggcggcaggctggcgagtcggagtggcacgag
gcgtacactgagtcccccgtgttcgtggtgacggggagcccccccttcaccccctatcac
atcagagtgagggccgtcaacgagaggggcccaggacccgagccagacaccgtcacaggg
tactcaggagaggacttacctctctccagtcctctgaatgtagcggtggagtttctcact
cgcacccttgtcaatgtgacctggagccccgtccccagagagagtgtgaggggccacctg
aaaggatacaaggttcattgctggcggtcccgcactctgcaggagagaccgaagcgccac
gcctccgaccgcttctccctcagcgtggcgggggggcagagccacgccctgctctccggc
ctgcagcccttcagcatctactacctggaagtgagcgtcttcaacgggagaggagaggga
ccggccagcgagccgctgagattcgacacacccgagggggtccccggcccccctgcctct
ctcaccctggacagcccctcagagtcactgttgattctgcagtggcagccccccctgcag
cccaacgggaacctgattggatatgaccttcactaccagcagattaacgaatcagggaac
agtcacctgaccgacgtggagttcaagccgcacgagttgaactggaccgtgctggaagtg
gacccgcgcagcctgtaccggttctacctgaaagcgcgcacgagcgccggggcagggccg
cacatctttgttgagggctctgccctgctggagggagccctgcccaagttggaaaacatc
agcatggtctctggaaagacatactctaatatcagctgggtcccgcaggagggctacagg
ggcgtggagtttcaaattcaatacctcaacaaacacaggtctaacagtccctggcaggtt
ctggagaaggtgagctcaacccagtccttctatcagatccagaacctggagcccgggaca
agttaccgggtccgatttaccgtcaagaacagaacggctgaagtgagcttctgggagcac
agcatccagactgctggcccagtcctctctgagctccacggtgggtttgcgacgcagggc
tggttcatcgggctgatcagcgctgtggttcttttgctgctcattcttctcattggctgc
ttcatcaagaggagcagagggggcaaatactctgtgaaggacaaggaggaaggacaggtg
gattcagaagcccggccaatgaaggacgagacgtttggagaatacagatctctggaaagt
gagaacgaggagaagcccgactccggcagccagacctcgatcatcgcggatctgaagccc
ctgggcagcgacgacagcctggctggctatgggggcagcgtggacgtgcagttcaacgag
gacggctccttcatcggccagtacagcgggaagaaagagcccagcacagctgcgggccag
gggagctcggggcccgcctccccagtgaaccccccgcccaccgcagggcccctggagttc
caacccctagcgtcggggagcagggggggggggcacaacttctga
DBGET
integrated database retrieval system
