Polyodon spathula (Mississippi paddlefish): 121328988
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Entry
121328988 CDS
T07273
Name
(RefSeq) ubiquitin-like modifier-activating enzyme 1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121328988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121328988
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121328988
Enzymes [BR:
pspa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
121328988
Ubiquitin system [BR:
pspa04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
121328988
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121328988
Exosomal proteins of other body fluids (saliva and urine)
121328988
Exosomal proteins of colorectal cancer cells
121328988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_FCCH
E1_4HB
E1_UFD
Motif
Other DBs
NCBI-GeneID:
121328988
NCBI-ProteinID:
XP_041130083
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Position
16:29770809..29848573
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AA seq
1039 aa
AA seq
DB search
MADNTDIDESLYSRQLYVLGHEAMRRMKEADVLISGMRGLGVEIAKNIILAGVKSVTIHD
EGQTQWGDLSSQFFLREGDVGQNRAESCKSQLAELNVYVPVTCYTGPLSEDILSVFQVVV
LTNASLEEQLRIGSFCHSCGIKFIVADTKGLCGQLFCDFGDKFLVTDPDGEQPLSTMVVH
ISKGNPGVVTCLDEKRHGLQDGDYVTFSEVHGMTELNNHEPIEIRIIDTYMFSICDTSGF
SEYKKGGIVTEVKMPKTLTFKPLKDSLNDPEMNVTDFSKIERHYTFHIAFQALHRFVKET
GRLPKPRGEADAEKVVAITRTLNQEAPSTSQREQLDESAVRKLALGAAGDLSPINAFIGG
VAAQEVMKACSGKFTPLKQWLYFDALECLPEENEELAVTEETCAPRGCRYDGQIAVFGSA
FQEKLAGLKYFMVGAGALGCELLKNFAMIGLAAGEGGNITVTDMDSIEKSNLNRQFLFRQ
GDVTKLKSETAALAIRKMNPSLHISAHQNRVGPETEHIYGHEFFSGLDGVVTALDSVEAR
MYVDRCCVRYQKPLLESGTQGTKGHTQVIVPFLTESYGQEQGGTQNTFPMCTLKNFPHSI
LHTLQWARDEFEGLFKQTAEHVNQYLQDPQFVKRMLKQGGAEALDILQGVYDSLGARRPR
DWAGCVSWARCHWESCYRNNIQQLLHCFPSDKVTSSGLPFWSGSKRCPHPLIFDPNNTTH
MDYIVASANLYAQTYGIEGTRDRGEIARTLQAVSVPDFTPRSGIRIHTTDKEMQDDKEGV
DNSKLEELEVKLASPQNFGVSSMNPLEFEKDDDTNFHIDFIVAASNLRAENYDIPPADRH
KSKQIAGKIIPAIATTTAAVVGLVCLELYKVVQGHKKTYQNSFINLAMPSCNLWKPIEAR
KHKVSELEYTLWHHFPIQGFKADGEEMTVTDLLDHFKITYSLEITQLFYGASMLYYSGNS
EEKRTKRLKQRVSEAIQEVTNMEIPNHVQVLELTPVFAEENDSEENLTVPFILYYLRSFE
PGLAWPGQSPLSWIQKEKH
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaacactgacattgatgaaagtctttactctcgacaactgtatgtgctgggc
catgaggcgatgcgccgcatgaaggaggcagacgtgcttatctctggaatgaggggattg
ggagttgagatcgccaaaaacatcatcctggcgggagtgaaatcagtcactatccacgac
gagggccagacccagtggggagacctttcctctcagttcttcctgcgggagggcgacgtg
ggacagaaccgggctgagagctgtaaatcccagctagccgagctcaacgtctacgtccca
gtgacctgttacactgggcctctcagcgaggacatcctgtcagtattccaggtggtggtc
ctgacgaatgcttctctagaggagcagcttcggattggaagtttctgtcactcctgtggt
attaaattcattgtggcggacaccaaaggcttgtgtggccagcttttctgtgactttgga
gacaagtttctggtgactgatccagatggggagcagccactttcaactatggtagttcac
atctccaagggcaatcctggtgtggtgacctgtttggatgagaagagacatgggttacag
gatggagattacgtcaccttttctgaagtccacggcatgacggaactcaataatcacgaa
cccattgagatcaggatcattgatacgtacatgttcagtatatgtgacacttcaggattt
tcagagtataagaagggagggatcgtcacagaggtcaaaatgccaaagacactcaccttt
aaacccctgaaagactccttaaatgaccctgagatgaatgtgacagatttcagtaagatt
gaacgccactacaccttccacattgcgttccaggctctacatcgctttgttaaggagacc
ggacgactgcctaaacccagaggagaggctgatgcagagaaggtggttgccatcacgagg
accctgaaccaggaagccccatccacctcgcaacgagaacagttagacgagagcgctgtg
cgtaaactggcattgggcgcggccggagacctgagtcccatcaatgcctttattggagga
gtggcagcccaggaggtcatgaaggcctgcagtgggaagtttacccccctgaagcagtgg
ctgtactttgatgctctagagtgtcttcctgaggagaatgaagagctggctgtgacagag
gagacctgcgcaccaagaggttgtcgctatgatggacagatcgcagtgtttggctcggct
ttccaagagaagctggctgggctgaagtacttcatggtgggggctggtgcccttggctgc
gagcttctgaagaactttgcaatgattggcctggcagccggagagggtgggaacatcact
gtgacagacatggactccattgagaagtctaatctgaaccgtcagttcttgtttcgtcaa
ggagatgttacgaagttgaaatcggagaccgccgccctggccatcagaaaaatgaacccc
tcactccacatatcggctcatcagaacagggtcggcccagagacggagcacatctacgga
cacgagttcttctctgggctggatggtgtggtcaccgcactggacagcgtggaagccagg
atgtacgttgacaggtgctgtgttcgctaccagaagcccctgctggagtcgggcactcag
ggcaccaaggggcacacacaggtcatcgtgcccttcttgactgagtcttacggacaggaa
cagggaggaacacagaacaccttccccatgtgcacactcaagaacttcccacactccatc
ctgcacaccctgcagtgggcccgagatgagtttgaagggcttttcaaacagacggctgaa
catgtgaaccagtacctgcaggacccccaatttgtgaaacggatgctgaagcagggaggg
gcagaggccctggatatcctgcagggagtgtacgacagcctgggagcacggcggccgcga
gactgggcaggctgtgtgagctgggcccggtgccactgggagagctgctacagaaacaac
attcagcagctgctgcactgcttcccgtctgacaaggtgacgagctcaggtctgcccttc
tggtcaggatccaaaagatgtcctcaccccctgatctttgaccccaataacaccacccat
atggactacattgtagcatcggctaacctgtatgcccagacctacggtatcgagggaacc
cgagaccgaggagaaatcgccaggacactccaagcagtcagcgtgccagacttcacccct
cggtccggcattcggatccacaccactgacaaggagatgcaggatgacaaggagggagtg
gacaacagcaagctagaagagctggaggtcaaactggcgtctccacagaactttggcgtg
tccagtatgaacccactagagtttgaaaaggatgatgacacaaatttccatatagatttc
attgttgctgcctctaacctacgagctgagaactatgacatcccccctgctgaccggcac
aagagtaagcagatcgctgggaagatcatccccgcgattgctaccacgacggctgctgta
gtcggcttggtgtgtctagagctctacaaggttgtccagggtcacaagaagacttatcag
aacagcttcattaacctggccatgccgtcctgtaacctgtggaagcccatagaagcgagg
aagcataaggtctcagagctggagtatactctttggcatcacttccccatccagggcttc
aaggctgatggagaggagatgaccgtgactgacctcctggatcacttcaagatcacatac
agcctggagataacccaactgttttatggagcgtcaatgctgtactactccggcaattct
gaggagaaacgcactaaaaggctgaaacaaagggtgtctgaagccattcaagaggtcact
aatatggagatccccaatcatgtgcaagtgctggaactgacgccagtcttcgcagaagag
aatgacagtgaggaaaacctaacggtcccgtttatcctgtattacctccggtcatttgaa
cctggcctggcctggccaggccagtcgcccctctcctggatacagaaagaaaaacattag
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