Polyodon spathula (Mississippi paddlefish): 121328992
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Entry
121328992 CDS
T07273
Name
(RefSeq) coiled-coil domain-containing protein 174-like
KO
K25178
coiled-coil domain-containing protein 174
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121328992
03041 Spliceosome [BR:
pspa03041
]
121328992
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121328992
Spliceosome [BR:
pspa03041
]
Complex C
Other components
EJC/TREX
121328992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
121328992
NCBI-ProteinID:
XP_041130087
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All DBs
Position
16:25775598..25786168
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AA seq
364 aa
AA seq
DB search
METERDGEPKTEEENTLDKSKQKLEEKARLYEQMTNGDLLDEETESLFLVDFTQKIIDQK
RDAAKRTAVRESAEEALPDSEIPPPENPDQEWVDYVDSLGRSRRCMKKDLPELLKMDKKP
AFEKVTDKGKTLLSEDMRRELQRQQWEEEEEAALKRPIGPLHYEDIRDSEARELGVGYFA
FAQDEALRFKQRETLDMLQDQTTEQRAKREKLKGKQKAMLDARLAKVRQRKMKKLKVDGV
EEELDVADNEGSTFLNCIAQLKVIVANIILSLILNREFRSEFALGQWTSQCRDEREAEFA
PPSEYFSDYKKPNQGKSWIRTRQGYPPQGPAAQSPGSTQASASQTHPPEQQSLDDLLAYY
KHSV
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgagagagatggggagccgaagactgaagaagagaacacactggacaagtca
aaacagaagctggaggagaaggccagactgtatgagcagatgacaaatggagatctacta
gatgaagaaactgagagcctgttcctggtggattttacacagaagattatcgatcagaag
agagacgcagccaagagaacagcagtgagggaatctgctgaggaggcgctgccagacagt
gagatcccacctccggagaacccggaccaggaatgggtggattatgtcgattcactgggt
cgatcaaggcgatgcatgaagaaggatttacctgagttgctaaaaatggacaaaaaacct
gcatttgaaaaggtaaccgacaagggaaagaccctgctgtctgaagacatgcgtcgtgag
ctgcagcggcagcagtgggaggaggaggaggaggcggcgctgaagaggcccatcggacca
ctgcattacgaggacatccgagattcagaggcccgggagcttggtgttggttattttgcc
tttgctcaagatgaagcactcagatttaaacagagggagactctggacatgttgcaagac
cagaccactgagcaaagagccaagcgagaaaagttaaagggcaagcagaaagccatgttg
gatgccagacttgcgaaagtacgtcagaggaagatgaagaaactgaaagtagatggagta
gaagaggaactggatgtagcagacaatgaaggtagcacatttctaaactgtatagctcag
cttaaagtaatcgtagctaacataatcctttcattaatcttaaacagagaattccgttca
gagtttgcgcttggccagtggacaagtcaatgcagggatgaacgggaggcagagtttgct
cctccttcagaatacttcagcgactataagaaacccaaccaggggaaaagctggatcagg
accaggcaaggctatcccccccagggcccggcagcacagagtcctggaagcacgcaagca
tcagcctcccaaactcatccaccagagcagcagagtctcgacgacttgctggcatattac
aaacactcagtataa
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