Polyodon spathula (Mississippi paddlefish): 121329067
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Entry
121329067 CDS
T07273
Name
(RefSeq) TATA element modulatory factor-like
KO
K20286
TATA element modulatory factor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121329067
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121329067
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
121329067
NCBI-ProteinID:
XP_041130306
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All DBs
Position
16:31936647..31945463
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AA seq
1120 aa
AA seq
DB search
MSWFNATHLSSFAKQAFTTAQKSIDRVLDIKEEDQWGDTVMPSYDVPGTGSSASGGWGTT
QWASPPEESISSGSTEAITTPVTRTVVDESEHFFSVFLSSTDLQSVKNTPVVSIPPTKAP
RPKEENKEISDTSNSRQTDLVETTGKLEIKAQTDPRPENIELTKSDLDVATDGQETLKEC
KGECVNEEKISDNSIKIEFSEVKLNQSVSPTSTSTKATAGNGQSVGSPPDSPAKPHTESS
KDLILDSKDAKSEDRQSHTPSPPVSTFSSGTSTTSDIEVLDHDSVISESSASSRQESNES
KASLHLMQTSFQLLSASACSDFQRLDDYQKLTESSGSSDAFERIDSFSMQTLDSRSVSEI
NSDDELPGRACTLASVTTSRTASTPVAANPDESKSEELNDTVKDRSLEENEMEESCRSAT
PVNCEEPEELIESDQASSVFCTVTDEPEQTSVHPTSKEGQANPVYHNMQKVIDDLTIRLE
KRETQILAVSKDKARLEEEYDNLKDEMINLKEECCSVQSLKEEFTQRIADAEKKAQLACK
ERDALKKEVKTLKEELSTRLNSNETAEIIKEKDEQIKGLLEEGEKLSKQQLHNSNSIKKL
RVKDKENESLLSKQSKKIKELEEELKHLQQVLDGKEEVERQHRESIKKLNSVVERQENEL
SRHQTDLEEFQETNRSLQAALDNSYKELAELHRANATKDSKAQEAALSREIQAKEQLSVA
LEKAREESRMQQEALAMQVGDLRLALQRAEQQQGRKEDYLREEISELQQRLQGAESRNQE
LSQSVTSATRPLLRQIENLQATLGAQTTSWEKLEKNISDRLADAQAQLAAAVEKERAAIE
ELLTIKSQMATIESQNSLIRQEKSLLQVQLESEKSKRERLEDESSREHEELENVKADYTR
LLEESKKQKMLLTSQLEMEKLKVEQEKKKYFLSQEALKEKERKAFVHPALEATTLATPTL
SRSSSISGVDMASLHSSFLAQDDALDHSFGPMTTTASGSNLYDAVRMGAGSSVIENLQSQ
LKLREGEIMQLQFEISNLEKTRTVMAEELVKLTNQNDELEDQVKEIPRLRVQLRDLDQRY
NTILQMYGEKAEEAEELRLDLEDVKSVYKIQIDELLKTKK
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgagttggtttaatgcaactcacttgtctagttttgccaaacaggcttttacgacagct
cagaaatcaatcgacagggttttggacatcaaggaggaagaccaatggggagacactgta
atgccttcatatgatgtacctggaacaggttcttcagcaagtggggggtggggtaccact
cagtgggcatctcccccagaagaatccataagttctggatctacagaagcaatcacgacc
cctgtcacaaggaccgttgtggacgaatctgaacatttcttcagtgtctttttgtcttca
acagacctacaaagtgtcaaaaatactccagtggtttcaatacctcctacaaaagcacct
aggcccaaagaggaaaataaagaaataagtgatacttcaaattctaggcagacagatttg
gttgaaacaactgggaagctggaaataaaagcccaaactgatcccagacctgagaatatt
gaactaacaaagtctgatttggatgtggctactgatggacaggaaacactaaaagagtgc
aagggggaatgtgttaatgaagaaaaaataagtgataactctataaaaatagagttttct
gaagtgaaactaaaccagtctgtttcacccaccagtacaagtacaaaggcaactgctggg
aatgggcaatctgttgggagtcctcctgacagccccgcaaaaccacacacagaatcctca
aaagacttgatactggattcaaaagacgccaaatctgaagacaggcagagccacacgcct
tcgcctcctgtcagcactttctcttcaggaacatcaacaacgagcgacattgaggtgctt
gaccatgacagtgtcataagcgagagctcagccagttcaagacaagagtctaacgaatcc
aaagctagtttgcatttaatgcagacttcttttcagcttttgtctgcttctgcctgctca
gacttccagcgtctggacgactatcagaagctcacggagagctctggctcctcggatgct
tttgagagaatcgactctttcagcatgcaaacccttgatagccggagtgttagtgaaata
aactcggatgatgaattgccaggccgagcttgcaccttggcttcagttaccacaagccgc
actgcttcaactcctgtggcagcaaatccagatgagagcaaaagtgaagaactgaatgac
accgtgaaagacaggtctctggaagagaatgaaatggaagagagttgtcgcagtgcaact
cctgttaattgcgaagaacctgaagaattgatagagtctgatcaagcaagttcagtgttc
tgcacagtgactgatgagcccgaacagacttcagtccaccctacaagcaaggaaggccag
gcaaacccagtttatcataatatgcaaaaggttattgatgatctgacgatcagactggaa
aagagagaaacccagatattagctgtcagtaaagacaaagcaagactggaagaagaatat
gacaatcttaaagatgagatgataaacctgaaggaagaatgttgcagtgttcagtctctt
aaagaagagtttacccagcgaatcgctgatgctgaaaagaaagcacagctagcctgcaaa
gaaagagatgcattgaagaaggaagtgaaaacacttaaagaggaactgtctacaagactt
aattcaaatgagaccgctgaaattatcaaggagaaggatgagcaaatcaagggtctgctt
gaagaaggtgaaaaactttccaaacagcaacttcacaattccaacagcataaagaagctg
agagtgaaggacaaagaaaatgaaagcctgctctcaaaacaaagcaaaaaaatcaaggag
ttggaagaggagctgaagcatttgcagcaggtgttggatggcaaagaggaagtggaaagg
cagcaccgtgaaagcattaagaagctgaacagtgtggtcgagaggcaggagaatgagctg
agcaggcaccagacagacctggaggagtttcaagagacaaaccgcagcctccaggcagct
ctggataattcctacaaggagcttgcagagttgcacagagcaaatgctaccaaggacagt
aaagctcaggaggctgcacttagccgggagatacaggccaaggagcagttgagcgtggca
ctggaaaaggcccgggaagagtcaagaatgcaacaggaggccttagcaatgcaggtagga
gacctgaggttggctttgcagagagcagagcagcaacaaggtagaaaggaggattatctc
cgtgaagagatcagtgaattacagcagagacttcaaggagcagaatctcgtaaccaagaa
ctgagccagagtgttacatcagcaacaagaccattactccgacagattgaaaacctacag
gcaacacttggggcacaaaccacctcctgggagaaacttgagaagaacatctcagatagg
cttgctgatgctcaagcacagctggcagctgcagtggagaaagagcgtgccgctatagaa
gagcttcttactataaaatcccagatggcaactatagagtcccagaacagtctcatccgc
caagagaagagcctcctgcaggttcagctggagtcagagaaatccaagcgagagagactg
gaggatgaaagcagcagggagcatgaagagttggaaaatgtgaaggctgactacacaaga
ctactggaggaatctaaaaagcaaaagatgcttctaacaagtcagttagaaatggagaaa
ctgaaggttgagcaagaaaagaagaaatattttctatctcaagaagcattaaaggaaaag
gaaagaaaagcctttgttcatcctgccctagaagcaactactttagcaactccaacctta
tcccggtcgagctctatcagtggggttgatatggcaagcttacattcgtccttccttgca
caggatgatgcccttgatcactcatttggaccaatgaccacaactgctagtggaagtaat
ctttatgatgctgttcggatgggggcaggatccagcgttattgaaaacctgcagtctcag
ctgaagctacgggaaggggagataatgcagcttcagtttgaaatttcaaacctagaaaaa
acacggacagtaatggcagaggagttggtgaaattaaccaatcaaaatgatgaacttgaa
gatcaggtaaaggaaattcccaggctgcgtgtccagctaagggaccttgaccagagatac
aacaccattttacagatgtatggtgagaaagcagaagaagcagaggagcttcgacttgac
ctagaagatgtgaagagcgtgtacaaaatccaaatagatgaacttttgaaaacaaagaaa
taa
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