Polyodon spathula (Mississippi paddlefish): 121329092
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Entry
121329092 CDS
T07273
Name
(RefSeq) red-sensitive opsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pspa04030
]
121329092
G protein-coupled receptors [BR:
pspa04030
]
Rhodopsin family
Vision
Opsin
121329092
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Sru
7TM_GPCR_Srsx
TctB
7tm_4
MpPF26
Motif
Other DBs
NCBI-GeneID:
121329092
NCBI-ProteinID:
XP_041130359
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Position
16:complement(20436531..20440718)
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AA seq
367 aa
AA seq
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MADHWRDPVFAARKRQEETTQDSIFVYTNSNNTRGERHKPWSEGNYHIAPRWVYNLSSLW
MIFVFFASLFTNGLVLVATYKFKKLRHPLNWILVNLAIADLGETLLASSISVCNQIFGYF
ILGHSMCIFEGYVVATCGIAGLWSLTVISWERWVVVCKPFGNVKFDAKWAASGIIFSWVW
SASWCAPPIFGWSRYWPHGLKTSCGPDVFSGSEVPGVQSYMLVLMITCCIIPLAIIILCY
IAVWLAIRAVAQQQKESESTQKAEKEVSRMVVVMIIAYVVCWGPYTFFVCFGAANPGYAF
HPLAASLPAYFAKSATIYNPIIYVFMNRQFRNCIMQMFGKKVDDGSEVSSTSKTEVSSVS
SSSVAPA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcactggagggacccggtttttgcagccaggaaaaggcaggaagaaacgaca
caggactcgatctttgtctacactaacagcaacaacacacgaggtgagcggcacaaaccg
tggtccgaagggaactaccacatcgccccccgctgggtgtacaacctctcctctctgtgg
atgatcttcgtgttcttcgcctcgctcttcaccaacggcttggttctggtggccacctac
aagttcaagaagctccgacacccgctgaactggatcctggtgaacctggccatcgccgac
ctgggggagaccttgctggccagcagcatcagcgtctgcaaccagatattcggatacttc
atcctgggacacagcatgtgcatcttcgagggctacgtcgtcgccacctgcggcatcgcc
gggctctggtctctcaccgtgatttcgtgggagagatgggtagtggtctgtaagcccttt
ggcaatgtcaagtttgatgccaagtgggccgccagtggcatcatcttctcgtgggtgtgg
tcggcgtcctggtgcgcccctccaatatttggttggagcaggtactggccccatggttta
aagacgtcgtgtggccccgatgtgttcagtggcagcgaggtccctggggttcagtcctac
atgttagtgctgatgataacctgctgcatcatccccttggctatcatcatcctctgttac
atcgccgtgtggctggctatccgagcggtcgcccagcagcagaaggaatccgagtcgacg
cagaaagccgagaaggaagtgtcccggatggtggtggtgatgatcattgcttacgtcgtg
tgctggggcccctacacgttcttcgtctgcttcggcgcggccaaccctggctacgccttc
catcccctggcagcctcgttgcccgcctacttcgccaagagcgccaccatctacaacccg
atcatctacgtgttcatgaacagacagttccgtaactgcataatgcagatgttcggaaag
aaagtcgacgacggatcagaagtgtcttccacttccaagacagaagtatcttccgtttca
agttcctctgtggcaccggcataa
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