Polyodon spathula (Mississippi paddlefish): 121329114
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Entry
121329114 CDS
T07273
Name
(RefSeq) tumor protein p73-like isoform X1
KO
K10148
tumor protein p73
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04115
p53 signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
121329114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121329114
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
p53
121329114
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GFIT
Motif
Pfam:
P53
P53_tetramer
SAM_2
SAM_1
SAM_EPH
Motif
Other DBs
NCBI-GeneID:
121329114
NCBI-ProteinID:
XP_041130403
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Position
16:complement(7806253..7842107)
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AA seq
641 aa
AA seq
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MAQSSPADEGTTFEHLWSSLEPDSTYFDLSQNSHSGNNEAAASLPTNRAEVCMDVFQMRG
MNETVMSQYNLLNSSMDQNLGSRAASASPYSSEHTSNVPTPSPYSQPNSTFDAMSPAPAI
PSNTDYPGPHSFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKLSSLAPPGSVI
RAMPVYKKAEHVTEVVKRCPNHELGRDFNDGQVAPASHLIRVEGNNLSQYVDDPVTGRQS
VMVPYESPQVGTECTTILYNFMCNSSCVGGMNRRPILIIITLETRDGQVLGRRSFEGRIC
ACPGRDRKADEDHFREQQAMNDSVNKNGNANKRTFKQTPPNIPGPGVNMKKRRHGEEEIY
YIPVRGRENFEILMKIKDSLELVELVPQQMVDSYRQQQQQLLQRQNPVQPPTSYGSVLPN
MNKMHGGINKLPSVNQLVGQQPQQNQSAAPNMGPMGPGMMNSHHMQQNGDMNGGHSAQSM
VSASHCTPPPQYNPDPSLVSFLTSLGCQNCIEYFTSQGLQNLYHLQNLTMEDLVALKIPE
QLRLVIWRGLQDLKQGHDYGGQQLIRSSSSNTSTMAIGPTGELQRQRVMEAVHFRVRHTI
TIPNRTSTGTSEDWPDFGFDVPDCKSRKQSIKEEFTENEIN
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtcttctcctgccgatgaagggaccaccttcgagcatctctggagtagcctg
gaaccggacagtacttatttcgatctttcacaaaacagccactctggtaacaacgaggca
gccgccagcttgccaacaaaccgggccgaggtgtgcatggacgtcttccagatgaggggc
atgaatgaaacagtcatgtcccagtacaatctgctgaacagcagcatggatcaaaatctg
ggcagccgagctgcctctgccagcccgtacagctccgagcacacctcgaatgtcccgacg
ccttcgccctactcacagcccaactctaccttcgatgccatgtcacccgcaccagccatc
ccctccaacactgactacccggggccacacagcttcgaggtcaccttccagcaatccagc
acagccaagtcagccacctggacgtactctcctttactgaagaagctgtactgtcagatt
gctaagacctgtcccatacagatcaagctgtcctcgctggcccccccgggcagtgtgatc
cgggccatgccggtctataagaaggcagagcatgtgaccgaagtggtgaagcgctgcccc
aaccacgagcttggcagagacttcaatgacggtcaggtggctccagcgagtcacctgatt
cgggtggaagggaataacttgtcccagtacgtagatgacccagtgactggaaggcagagt
gtgatggtaccttatgagtcaccacaggttggaacagaatgcactacgatcctgtacaac
ttcatgtgtaacagcagttgtgtgggaggcatgaacagaagacccattcttattattata
actctggagaccagagatggccaggtcctgggtcgaaggtcgtttgaggggcgtatctgc
gcctgtcctgggcgggacaggaaagcagacgaggatcacttccgcgagcagcaggccatg
aacgacagcgtgaacaaaaacggcaacgcaaacaaacgcacttttaaacagacacctccg
aacatcccaggcccaggcgtcaatatgaaaaagcgacgacatggcgaagaggagatttat
tatattcctgtgcgtggccgggagaactttgagatcctgatgaagatcaaggacagtctg
gagctggtggagctggtccctcagcagatggtagactcatacagacagcaacagcagcag
ctgctccagagacagaaccccgtccagccccccacctcttacggctctgtgctgcccaac
atgaacaagatgcacggaggaatcaacaagctgccttccgtcaaccagcttgtcggacag
cagccccagcagaaccagagcgcagcacccaacatgggacccatgggtcccggcatgatg
aacagtcaccacatgcagcaaaatggtgacatgaacggaggtcattctgcccagtcaatg
gtgtctgcatcccactgcacccctcccccgcaatataaccctgaccccagcctcgtcagt
tttttaacgagtctcggctgtcaaaactgcattgaatacttcacatcccaggggctacag
aacttgtaccatctccagaacctaacaatggaggacctcgtggctctgaagatcccggag
cagctccgcctggtgatctggagagggctccaggacctgaaacagggtcacgactacggg
ggccagcagctcatccgctcctccagcagcaacacctccaccatggccatcggccccacg
ggggagctgcagcggcagcgcgtcatggaggccgttcacttccgcgtgcgacacaccatc
accatccccaaccgcactagcacgggaacctctgaggactggcccgacttcggcttcgat
gtcccggactgcaagtcccgcaagcaatccatcaaggaggagtttacagaaaacgagatc
aattag
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