Polyodon spathula (Mississippi paddlefish): 121329115
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Entry
121329115 CDS
T07273
Name
(RefSeq) SPRY domain-containing SOCS box protein 1-like
KO
K10343
SPRY domain-containing SOCS box protein 1/4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121329115
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul5 complex
Target recognizing subunit
121329115
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SPRY
SOCS_box
Motif
Other DBs
NCBI-GeneID:
121329115
NCBI-ProteinID:
XP_041130407
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All DBs
Position
16:6213967..6235708
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AA seq
273 aa
AA seq
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MGQKVPGGIKTVDMRDPAFRPLKLELQALDYTKPARLDMLLDMPPVPHSVQLLHSWNNDD
RSLNIFVKEENPLIFHRHPVAQSTDGIRGKVGYTRGLHVWEICWAMRQRGTHAVVGVATS
EAPLHSVGYTALVGNNHESWGWDLGRNKLCHDGKNQPCKTYPAFLEPDETFIVPDSLLVV
LDMDEGTLSFIVDGQYLGVAFAGLKGKKLHPVVSAVWGHCEIRIRYINGLDPEPLPLLDL
SRRSVRVALGKERLNEIHALPLPASLKNYLLYQ
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggggcagaaagttccaggagggattaagaccgtcgatatgagggacccggctttcaga
ccgctcaagcttgagctgcaggctctcgactacaccaagcctgcacgattggacatgctt
ttagacatgccgcctgttcctcactcggtgcagctgctgcactcgtggaacaatgacgat
cgctccttaaacatctttgtaaaagaggaaaacccgttaatatttcaccggcatccggtg
gcgcagagcacagatgggatcagaggtaaagtaggatacaccagaggacttcacgtgtgg
gagatctgctgggcaatgcgacagagaggcacgcatgcggtagtgggagttgcaacgtcg
gaagctcctttgcattcggtaggatacacggcactagtcgggaataaccacgaatcctgg
ggctgggatctcgggaggaacaaactgtgccacgacggcaagaatcaaccgtgtaaaacg
tacccagctttcctggaacctgacgagaccttcattgtaccagattccttgttggtggtg
ttggacatggacgaggggacgctcagttttattgtggatggacagtatttaggagttgct
tttgcgggactgaagggtaaaaaactccaccctgtagtaagtgctgtctggggtcactgt
gaaatccgaattcgctacataaatggacttgatcctgaacctctgccactgctggacctc
tctcgtcgttcggtgcgggtcgccctggggaaggaacgcttgaatgaaatccatgcactc
cccttgccagcgtcccttaagaactatctactctaccaatga
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