Polyodon spathula (Mississippi paddlefish): 121329136
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Entry
121329136 CDS
T07273
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04260
Cardiac muscle contraction
pspa04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121329136
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121329136
04261 Adrenergic signaling in cardiomyocytes
121329136
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121329136
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121329136
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GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA_3
VWA
VWA_2
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
121329136
NCBI-ProteinID:
XP_041130450
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Position
16:36020644..36162628
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AA seq
1084 aa
AA seq
DB search
MLGNSSISRVFFGFHFIWIIFWLTLVDVARSQQPIPLSVVKLWASAFGGEIKSISAKYSG
SQLLQKKYKEYEKSVLVEEIDGLSLVKKLAKDMEEMFHKKAEAMRRLVEAAEEAHLQHED
DPELQYEYFNAVLINEVDQEGNSVELGQEFILQPNDHFNDLPVNISLSVVQVPTNVYNKD
SAIMNGVYWSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWKPDEHGVIAFDCR
NRKWYIQAATSPKDVIILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNEELH
YVEPCLNGTLVQADRTNKDHFREHLDKLFAKGIGMLNIALTEAFTLLNDYNRTGQGSICS
QAIMLITDGAVDTYDAVFAKYNWPDRKVRIFAYLIGRETAFADNLKWMACANKGYFTQIS
TLADVQENVMEYLHVLSRPKVIDQEHDTIWTEAYIDSTLPQAQQFGNLGPVLMTTVAMPV
FSTKNETRNKGILLGVVGTDVPVQELLKTIPKYKLGIHGYAFAITNNGYILTHPELRPLY
ETGKKRRKPNYSSVDLSEVEWEDKDDFLRNAMVNRVTGTFDMEVKKTVDKGKRVLVMTND
YYYTDIKGTPFSLGVALSRGHGQYSFRGNVTVEEGLHDLEHPDVALADEWTYCNTDLHPE
HRYLSQIEAIKLYLTGKEPLLQCDKELIQEVLFDAVVTAPLEAYWTSLALNKSENSDKGV
EIAFLGTRTGLSRINLFVVPEQLTNQDFLTAEDKEGVFNADHFPLWYKRAAEQIPGTFVY
SLPFSSENKSVVLASTAIQLSDDRKSPIVAAVGIQMKLDFFQRKFWTASRQCAALDGKCP
TSCDDDNISCYLIDNNGFILVSEDFSQTGIFFGEVEGAVMSKLLQMGSFKRVTLYDYQAI
CKIYAESSDSAHSLLDPYFAAFAAVKWILTELVIFLVEFNLYSWWYSDLTVKAQRAMLVP
CDTEYPAFVSERTIKETTGTLHCGDCTKSFVIQQIPSSNLFMVVVDQECDCTSAMPITME
PIEIMYNESLKCERLKVQKDRRRPDSCHPFHPQENSRECGGALGLHPRLPIVLLLSLLLT
LFTR
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgctggggaattcgagcatctcgcgtgtgttttttggtttccactttatttggataata
ttttggctgacgttggtggacgttgccaggtcccagcagccgatccctctgtctgttgtc
aagttatgggcctctgcgtttggaggagaaatcaaatcaatttcagccaaatactcgggt
tcacaactcctacagaagaaatacaaagagtatgagaaatcggttctcgttgaagaaatc
gatggcctaagtctggtcaaaaagctggcgaaagatatggaagagatgttccacaagaaa
gctgaagcaatgaggagacttgtagaagctgctgaagaagcccatttacagcatgaggat
gatcctgagctgcagtatgaatatttcaatgctgtgttgataaacgaagtggaccaggaa
ggcaacagcgtggaactgggacaggagttcattttgcagccaaatgaccattttaacgat
ttgccggtcaacatcagcctcagcgttgttcaagtcccaaccaacgtgtacaacaaagat
tctgcaataatgaatggggtttactggtcggaagccttaaataaagtatttgttgataat
tttgaacgcgacccgtctttgatatggcagtactttgggagtgcaaaaggtttcttcaga
cagtatccaggtataaaatggaagccagatgaacacggagtcattgcttttgactgcagg
aacagaaaatggtacattcaggcagccacttccccaaaagatgtgataattttggtcgac
gtcagtgggagtatgaaaggactacgtttaacaatagctaggcagacagtttcctcaatc
ttggacacacttggggatgatgacttcttcaatataattgcgtacaatgaagaactccat
tacgttgagccgtgcttaaatggaacattggtacaagctgacagaaccaacaaagatcat
tttagagaacatcttgacaagctttttgccaaaggaatcgggatgctcaacattgctttg
actgaggccttcactcttcttaatgattataatcgaaccggtcaaggaagtatctgcagt
caggccatcatgctgatcacagatggcgcagtggacacctacgatgcagtatttgcaaaa
tacaattggccagacagaaaggttcgcatatttgcttatttaattggacgtgagactgcc
tttgccgataaccttaagtggatggcctgtgctaataaaggatatttcacacagatctcc
acattagcggacgtgcaagaaaatgtgatggagtacctccatgtcctcagtaggcccaaa
gtcatcgaccaggaacatgacactatatggacagaggcatacattgatagtacactccct
caggcccagcagtttggtaatctgggaccagtgctgatgactactgttgccatgcctgta
tttagcacaaaaaacgagactcgcaataaaggtattcttctgggtgtagtggggacagat
gttccagttcaagaacttctgaagacgatcccaaagtacaagctaggcattcacgggtat
gcctttgcaatcacaaacaacggatatattctgactcatccagaactccgccctctgtat
gaaacagggaaaaagaggagaaaacccaactatagcagtgttgacctctcggaagttgaa
tgggaagataaagatgattttctccgcaatgcaatggtgaacagggtaactggcacgttc
gacatggaggttaagaagaccgtggacaaagggaaacgagtcctggtaatgaccaatgat
tactactatacagatatcaagggcactccattcagtctaggagtggctttatctcggggc
cacgggcagtactcattcagaggaaatgtcaccgtggaagaagggctgcatgacctcgag
catccagatgtggccttggcagacgaatggacttactgcaacacagatcttcacccggag
catcggtacctctcccagattgaagctattaaactctacctcactgggaaagagccattg
ttacagtgtgacaaagagttaatccaagaagtgctgtttgatgctgtggtgacagcacct
ctggaagcttactggaccagccttgctttaaacaaatcggaaaattcagacaagggtgtc
gagatagcattcttaggaacgcgcactggcctctcccgaataaacctctttgtagtcccg
gagcagctcacaaaccaagacttcctgacagctgaagataaggagggtgtattcaatgcg
gatcactttccactgtggtacaagagagctgcggaacagatcccaggaacctttgtctat
tctctcccattcagctcagaaaataaaagtgtggtgttagccagtactgccatacagctg
tcagatgacaggaaatctcccattgttgcagctgtaggtatccagatgaaactggatttt
ttccaaaggaagttttggactgccagcagacagtgtgcagcacttgatggaaagtgtcct
acaagctgtgatgatgataatatcagctgttacctcatagacaacaatgggttcattttg
gtttctgaagacttctctcagactgggatattctttggtgaggtggaaggagctgtaatg
agcaaattgttacaaatgggctcctttaaacgagtaaccctttacgattaccaagccatc
tgtaaaatatatgctgaaagtagtgacagtgcacacagcttattggatccctattttgcc
gcctttgctgcagttaagtggatactgactgagcttgtcatatttttggtggaattcaat
ctgtacagttggtggtattctgaccttacagtaaaagcacagagagccatgcttgtgccc
tgcgatacagaataccctgcctttgtgtcggaacggactataaaggagaccacagggact
ttacactgcggggactgcacaaaatcatttgtgatccagcagatccccagcagcaatctg
tttatggtggtggttgatcaggagtgtgactgcacgtcagccatgcccatcacaatggaa
cccatagaaatcatgtataacgaatctctcaagtgtgagcgtttgaaagtacaaaaggat
agaagacgcccagattcgtgtcatccctttcaccctcaggaaaactcaagagaatgtgga
ggagctcttgggcttcacccccgacttcccattgtccttctgctgtctctgctcctcact
ctgttcacaaggtga
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