Polyodon spathula (Mississippi paddlefish): 121329188
Help
Entry
121329188 CDS
T07273
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121329188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121329188
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121329188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
DUF3427
Motif
Other DBs
NCBI-GeneID:
121329188
NCBI-ProteinID:
XP_041130556
LinkDB
All DBs
Position
16:10298259..10299970
Genome browser
AA seq
142 aa
AA seq
DB search
MAPTITAAMRYSQGHVAMTNKLRKPVVEKMRRDRINSSIEQLKTLLGKEFVKQQPDSKLE
KADILEMTVCYLRQSASARPATGNEGYSRCVQEIVRFLSRDEMKTETQRKLLNHFQAAQN
CPVHQTPVKEATPVKSALWRPW
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atggcacctacaatcactgcagctatgcgatactcacagggacacgtggcaatgacaaac
aaattgagaaaaccggtggttgaaaagatgcgcagagatcgtatcaacagcagcatcgag
cagctcaagacgttactgggaaaagaattcgtgaagcagcagcccgattccaaactggag
aaagcggacatcctggaaatgaccgtctgctacctgagacagagcgcctccgcccggcca
gcgacgggaaacgaaggctactccaggtgtgtgcaagaaatcgtgcgcttcctttcccgg
gatgaaatgaagacagaaacccagagaaaactactgaaccatttccaagctgcgcagaat
tgtccagtgcatcagacccccgtcaaagaggcgaccccggtgaagagtgccctctggcgg
ccctggtag
DBGET
integrated database retrieval system
