Polyodon spathula (Mississippi paddlefish): 121329189
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Entry
121329189 CDS
T07273
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 3-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121329189
03012 Translation factors [BR:
pspa03012
]
121329189
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121329189
mRNA cycle factors
Stress granule specific factors
121329189
Translation factors [BR:
pspa03012
]
Eukaryotic type
Initiation factors
eIF-4
121329189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
PP_kinase
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
121329189
NCBI-ProteinID:
XP_041130558
LinkDB
All DBs
Position
16:complement(3883749..3943675)
Genome browser
AA seq
1745 aa
AA seq
DB search
MSLPPRAVPKSAAAAGSGPGTGLSPPSQLRALPTSVPVPGAPAAPQPPAAPPPQVFLNVS
RFRIPRGQHTLEDRIFPTQATVAAVFGVPRQPAPPYAAHELNKGHPSLAATPPGHTSTPG
LSQVSVSTAHLYRCIKGWESVGGSPYTSGQNAAAAPPVYLPQQPMNAQPQSRSFAAGPRP
AHHQGGFRPIQFFQRSQMQTARATIPSNSPSIRPGSQNPAPAVYPPNQPIMMTMTAMPFP
SPQGTQYYIPQYRHSTPYVGPPQQYSVQPPGPNTFYPGPGPGEFPTPYGAPYYTGQTVFS
PSPPIIVPTPQQPPPAKREKKTIRIRDPNQGGKDITEEIMSGGGGSRNTTPPVGRPSSTP
TPPQFLCPHPHYPHIFYLKSQQLSSQAPDHGHVMYSVENQLTPTAVDFKPEEKPKHDPAV
LKSSFPGLRPDVTAEKRDHIVTTQDLSPPEKPPELPLVIPAAVATPSSSPSLAAVPIAVT
SKTAFTVDRAESGSLREEPAPSVSPQPSDKALPDPPRSLSASPAIPTSTGVAAVMKEMNG
LSEKEATSPCSDVDMASHEPVLLLLQTPPPPLTSNAESQETHLREARAASPSLPAHPAST
CSAILTSTASAALIAAATTLPILQAVNQGTVEAGEGRRTPISSETKEVGDVDVQLEETLD
SQPPNSRKSPIPAQTAPAAPKTWKKPKEATGGQDEVLDADREPEPREEGSVEQALEAEPH
RPSPVPVEMKQQPVPEENGERELEPVRNGAEHVSESESTDSGATTGDKDSSTGTPQCIFQ
EASLDSDGKKQYDREFLLGFQFMAACVQKPEGLPQINDVVLDKINQNKLPMRPLDPRVMA
RGPDFTPAFADFSRQITGGRGAALLSAGLRRSQQGQRREPRKIITNVSVNEVQLRKAENA
WKPTLKRDEEPGENKTQDLFRKVRSILNKLTPQMFNQLMKQVTDLTIDTEERLKGVIDLV
FEKAVDEPSFSVAYGNMCRCLATLKVTMTDKPNSTVNFRKLLLNRCQKEFERDKVDDDVF
ERKQKELEAAASSSERERLQEELKEAKDKARRRSIGNIKFIGELFKLKMLTEAIMHDCVV
KLLKNHDEESLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQD
VIDLRLHNWVSRRVDQGPKTIEQIHKEAKIEEQEEQRKVHQQLLSKDKRRPVLQREETWN
TVPMSKNSRTIDPSKIPKISKPTIDDKIQLGPRAQMSWGKGSSGGAKASESDASRSSTTN
LNRFSALQSCAQPAVISPTTTPASEFDSRRSLSSRNSTGRERNDIPVSTALSRPATFTQG
SSNKEVQEEQPREALEMVTQLPTGAEEKSGTDTDRSGAYDAAKPDAPAALAADKPAITEE
EMERKSKSIIDEFLHINDYKEAVQCVEELCVPSMLHVFVRVGVESTLERSQIARDHMGQL
LFQLVQSGSLSTQEFFKGFAEILEFADDMAIDVPHIWLYLAELVIPMFREGGISMRELLS
EFSKPLLPVGRAGVLLSEILHQLCKQMSQRKVGALWRESGLNWIDFLPEEEDVHNFITDQ
KLQFTVSGCSSPTEALSKRDLSPDELNRQLEKLLLEDIVSDEQIFDWVEANLEESQMSST
PFLRALMTAVCKAAVKGESTPSRVDTAIIQRRLPVLLKYLNSDTEKQLQALYALQALIVK
LDQPPNLLRMFFDCLYDEDVISEDAFYKWEVSKDPAELEGKGVALKSVTAFFTWLREAEE
ESEDN
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccgccgagagcggtaccaaaatcagctgctgccgctggaagtggacccgga
accgggctgtctccgccgagccagctgcgggctcttccgacctctgtgccggtaccggga
gcaccggccgccccacagccgccagccgcgccgccgccgcaagttttccttaatgtgtcg
cgcttcaggatccccagaggtcagcacacacttgaagatcggatcttccctacgcaggcc
acagtagctgctgtgttcggtgtacccagacagcctgcacctccctacgcagcacacgaa
ctcaacaagggacatcctagtctagcggccacccccccaggccacacatccactccagga
ctctctcaggtatcagtatccacagcacacctatatcgctgcattaagggctgggagtca
gtcggagggtctccgtacacctctggacagaatgcagcagccgcacctcctgtgtacctt
ccccagcagccaatgaatgcacaaccacagagccgctcgtttgcagcggggcctcgtcct
gcccaccatcagggaggattcaggcccatccagtttttccagaggtcccagatgcaaacg
gcacgcgcaaccattcccagtaacagtccatcaattcgcccaggatcacagaaccccgcc
cctgctgtgtaccccccaaaccagccaatcatgatgaccatgactgccatgcccttccca
tctccacaaggaactcagtactacataccacagtaccgccacagcactccctatgtgggc
cctcctcagcagtattctgttcagccaccggggcccaacaccttctatcctgggcctgga
cctggggagttccccacgccgtacggagcaccctactacactgggcagactgtattcagt
ccctctccacccatcatagtgcctacaccacagcaacctccgcccgccaagagagagaag
aaaacgatccgaatccgagaccccaaccagggcgggaaggacatcacagaggagatcatg
tcaggagggggtgggagccggaacacaaccccacctgtaggcaggccgtcctccacgccc
acccctccccagtttttatgtccgcaccctcattatcctcacattttctacctcaaatcc
cagcagctgagcagccaggccccggatcatgggcacgtgatgtacagtgtggagaaccag
cttacccccacagctgttgacttcaagccagaagagaagccaaaacacgaccctgctgtg
ttaaagtcctcgttcccggggctgcggcctgacgtcactgctgagaagagggatcacatt
gtgaccacgcaggacctttctcctccggagaaacctccagagcttcctctggtcattcct
gctgctgttgccacacccagctcttcccctagccttgccgccgttcctattgctgtcacc
agcaaaacggcattcacagtggacagagctgaatcaggcagcctcagagaggaaccagct
ccctcagtctccccacagccctccgacaaggccctcccagaccctcccaggagtctctct
gcttccccggccatccccacatcaactggagtggccgctgtcatgaaagagatgaacggg
ctgagtgaaaaggaggcaacctcaccgtgcagcgacgtggacatggcctcccacgagcca
gtgctgctgctgcttcagactcctcctccgcccttgacttccaacgccgagagccaggaa
acgcatttgagagaggccagggcagcgagcccaagtctgccggcccaccctgccagcact
tgttccgctatcctaacttccactgctagtgctgctctcattgctgctgctaccactctt
cccatactccaggcagtcaatcaggggactgttgaggccggggaaggtaggaggacgccc
atcagctcagagacaaaagaagtgggagacgtggacgtccagctggaggaaaccctagac
tcccagccacccaactccagaaaaagtcctattccagctcaaactgctcctgctgcacca
aagacctggaagaaaccaaaagaggcgactggagggcaggatgaggtgctagatgcagac
agagagcctgagcccagagaggagggttctgtagagcaggccctggaggctgagccccat
cgacccagccctgtccctgtggaaatgaagcagcagcccgtccccgaggagaacggagag
cgggagctggagcctgtgagaaacggagcagagcacgtctccgagagtgagagcactgac
agtggagccaccacaggggacaaggacagctccactgggactcctcaatgcatcttccag
gaagcgtctctggactctgatgggaagaagcagtatgaccgggagttcctgctaggcttc
cagttcatggcggcctgtgtgcagaaaccagaggggctgccccagatcaacgatgttgtt
ctcgacaagataaatcaaaacaagctgccgatgaggcccctggaccccagagtgatggcc
cgtggccccgacttcactcccgccttcgcagacttcagccggcagatcacaggagggcga
ggggctgctttgctgagtgcgggtctgcggcggtctcagcagggccagcggcgagagcca
cgcaagatcatcaccaatgtgtctgtgaacgaggtgcaactgaggaaagctgagaacgcc
tggaaacccaccctgaaaagagacgaggagcccggcgaaaacaaaacacaggacctgttc
cggaaggtgcgtagcatcctgaacaagctgaccccgcagatgttcaaccagctgatgaag
caggtgaccgatctgaccatcgacacagaggagcggctcaagggggtcatcgacctggtg
ttcgagaaggccgtcgatgagcccagcttctccgtcgcctacggcaacatgtgccgctgc
ctcgctacgctcaaggtgaccatgactgataaacccaacagcactgtgaatttccggaag
ctgctattgaaccgctgccagaaagagtttgagagggacaaggtagacgatgacgtgttc
gaaagaaagcagaaagagctggaagctgctgcctcgtccagcgagcgggagcgactccag
gaggagctgaaggaggcgaaggacaaagcgcggcggcgctccatcggcaacatcaagttc
atcggggagctcttcaaactcaagatgctgactgaggccatcatgcacgactgcgtggtc
aagctgctgaagaaccacgacgaggagtctctggagtgcctgtgccggctgctcaccacc
atcggcaaggacctggacttcgagaaggccaagcctcgcatggatcaatacttcaaccag
atggagaagattgtgaaggagcgaaaaacatcgtcccgaatccgcttcatgttacaggac
gtcatcgacctcaggctgcataactgggtttcacggagagtggaccagggccccaaaacc
atcgagcagatccacaaggaggcaaagattgaggagcaggaggagcagaggaaagtgcac
cagcagctgctgtccaaggacaagaggagaccagtgctgcagagagaggagacctggaac
actgtacctatgtctaagaacagcaggacgatagaccccagcaagattcctaagatctcc
aagccaacaatagatgataagatccagctggggcccagagcacagatgagctgggggaaa
ggcagcagtggaggagctaaagccagtgaatcagatgcctctcgctcgagcactactaat
ttgaaccggttctctgcactacaatcttgtgcacagcctgctgtcatctctcctacaaca
acaccggcatccgagtttgattcccgcaggagtctcagcagccggaacagcacaggacgc
gagaggaacgacatccctgtgagcacagccctctcccggcccgccaccttcacccagggc
agcagcaacaaggaggtgcaggaggagcagccgagagaggccctcgagatggtcacgcag
ctgcccaccggcgccgaagagaagagcggtacagacactgaccgcagcggtgcttatgat
gctgcaaagcctgatgctccagcagcccttgctgcagacaagcctgccattactgaggag
gaaatggagaggaaatccaaatccatcatcgacgagttcctgcacattaacgattataag
gaggcagtgcagtgcgtggaggagttgtgcgtgcccagcatgctccacgtgtttgtgcgg
gtgggtgtggagtccacgctggagaggagtcagatcgcgagggatcacatgggccagtta
ctgttccagctggtgcagtcggggagcctctccacacaggagttctttaaagggtttgca
gaaatcctggagtttgctgatgacatggcgatcgacgttccccatatatggctgtatcta
gcagagctggtgatccccatgttccgtgaaggaggaatctctatgagagagttattaagt
gaattcagtaaacctttacttcctgtgggaagagctggggtattgctctctgaaatattg
caccaactatgcaaacaaatgagccagaggaaagttggagccttgtggagggaatctggc
ctcaactggatagatttcttaccggaggaagaggatgtgcacaactttatcactgaccag
aaattacagttcactgtttcgggctgctccagccccactgaggcactttcaaaaagagac
ctttctcctgatgaactgaacagacagctagagaaactccttctggaagatatcgtcagc
gatgagcaaatcttcgactgggtagaggctaatttagaagaatctcagatgagttcaact
ccatttcttagagctttaatgacagccgtctgcaaggcagcagtgaaaggggagagcacc
cctagccgtgtggacacagccattatccagcggagattgcccgttttgctcaagtacctg
aactccgatacggagaaacaattgcaagcactttatgcactacaagcattgatcgttaaa
ctcgatcagcctcctaatttgctccggatgttctttgactgcttgtatgatgaagacgtg
atctctgaggatgcattctacaaatgggaagttagcaaggatccagccgagctggaggga
aagggcgtggctctgaaatcggtcactgcctttttcacatggctacgagaagcagaggag
gaatcagaagacaattag
DBGET
integrated database retrieval system
