Polyodon spathula (Mississippi paddlefish): 121329212
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Entry
121329212 CDS
T07273
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121329212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121329212
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121329212
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
121329212
NCBI-ProteinID:
XP_041130620
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Position
16:complement(10288285..10288992)
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AA seq
142 aa
AA seq
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MAPTITAAMRYSQGHVAMTNKLRKPVVEKMRRDRINSSIEQLKTLLGKEFVKQQPDSKLE
KADILEMTVCYLRQSASARPATGNEGYSRCVQEIVHFLSRDEMKTETQRKLLNHFQAAQN
CPVHQTPVKEATPLKSVLWRPW
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atggcacctacaatcactgcagctatgcgatactcacagggacacgtggcaatgacaaac
aagttgagaaaaccggtggttgaaaagatgcgcagagatcgtatcaacagcagcatcgag
cagctcaagacgttactgggaaaagaattcgtgaagcagcagcccgattccaaactggag
aaagcggacatcctggaaatgaccgtctgctacctgagacagagcgcctccgcccggcca
gcgacgggaaacgaaggctactccaggtgtgtgcaagaaatcgtgcacttcctttcccgg
gatgaaatgaagacagaaacccagagaaaactactgaaccatttccaagctgcgcagaat
tgtccagtgcatcagacccccgtcaaagaggcgaccccgttgaaaagtgtcctctggcgg
ccctggtag
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integrated database retrieval system
