Polyodon spathula (Mississippi paddlefish): 121329237
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Entry
121329237 CDS
T07273
Name
(RefSeq) tubulin alpha chain, testis-specific
KO
K07374
tubulin alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04145
Phagosome
pspa04210
Apoptosis
pspa04517
IgSF CAM signaling
pspa04530
Tight junction
pspa04540
Gap junction
pspa04814
Motor proteins
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121329237
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121329237
09143 Cell growth and death
04210 Apoptosis
121329237
09144 Cellular community - eukaryotes
04530 Tight junction
121329237
04540 Gap junction
121329237
09142 Cell motility
04814 Motor proteins
121329237
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121329237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121329237
03036 Chromosome and associated proteins [BR:
pspa03036
]
121329237
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121329237
04147 Exosome [BR:
pspa04147
]
121329237
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121329237
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121329237
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121329237
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121329237
Exosomal proteins of other body fluids (saliva and urine)
121329237
Exosomal proteins of colorectal cancer cells
121329237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121329237
NCBI-ProteinID:
XP_041130661
LinkDB
All DBs
Position
16:22361016..22366335
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEGEAEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctccatacacgttggccaggctggggtccagattggcaatgcctgc
tgggagctgtattgcctggagcacgggatccagccggatggacagatgcccagcgacaag
accatcggaggtggagacgactccttcaacaccttcttcagcgagactggagccggcaag
catgtccccagagctgtgtttgtggacctggagcccactgtagttgacgaggtgcgcaca
gggacataccgacagctcttccacccggagcagctcatcactggcaaggaggacgctgcc
aacaactacgcccgcgggcactacaccatcggcaaggagattgtggacctggtgctcgac
cgcatccgcaaactgtctgaccagtgcacaggactgcagggcttcctgatcttccacagc
tttggcggtgggaccggctctggctttgcctccctgctcatggaaaggctctctgtcgac
tacggcaagaagtccaagctggagtttgccatctacccagctccacaggtttccacagca
gtggtggagccttacaactccatcctgaccactcacaccaccctggagcactcggactgc
gccttcatggtggacaatgaggccatctacgacatctgcagacgcaacctggatatcgag
cgtccgacctacaccaacctgaaccggctcattgggcagattgtctcctccatcacagcc
tccctgcgcttcgatggggccctgaacgtggatctcacagagttccagaccaacctggtg
ccctacccccgcatccatttccccctggtcacctacgctcctgtcatctccgcggagaag
gcctaccacgagcagctgtccgtagctgagatcaccaacgcctgcttcgagccagccaac
cagatggtgaagtgtgacccgcgccacggcaagtacatggcctgctgcatgctgtaccgt
ggcgacgtggtgcccaaagacgtcaacgcagccattgccaccatcaaaaccaagaggacc
atccagtttgttgactggtgccccactggcttcaaggttggcattaactaccagccgccc
acagtggtaccagggggtgatcttgccaaggtgcagcgcgcagtgtgcatgctgagcaac
accaccgcgatcgccgaggcctgggcccgcctggaccacaagttcgatctgatgtacgcc
aagcgagccttcgtgcactggtacgtgggagaagggatggaggagggagagttctctgag
gcccgggaggatctggcagctctggagaaggattatgaagaggtgggagttgactctgtg
gagggagaagctgaggagggagaggagtactga
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