Polyodon spathula (Mississippi paddlefish): 121329299
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Entry
121329299 CDS
T07273
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase RPUSD3-like
KO
K22537
mitochondrial RNA pseudouridine synthase RPUSD3 [EC:5.4.99.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121329299
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
121329299
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
121329299
NCBI-ProteinID:
XP_041130778
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Position
16:37496294..37502519
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AA seq
368 aa
AA seq
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MRCIFRRLSAAGAGRRWTAPALQDPYVFMPCVSGAAVPHLYSTGAWYGMDVPGPSPRERG
SRERRGERARASILKSPGVPEVGRLSREELTELLQRSLIYRAGPLVALNKPPGLPITGDE
LSLSTVLPDLQGALSLTGELHVVKTAARDQSGLVLLSTCHHTTNHLEDNFRKARRQKTPT
ATYWAVTVGTPDPPEGEIDVPLKLQTIGALQLVVPELSPSRGSVTHREVKRTRTRYRVLD
SGAGCSLLQLQPLSTFQSQLQVHLSVKLSPVLGDHVYSPRVGRVLGVPISLPVETALPRT
QVLQEALLRRMHLTQQQMHRMPLHLHLLQLHLPALGKERKETVVTAPPPEYFLRTLCLLG
LTPPEGRG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcattttcaggcggctgagtgcagcaggagcaggtaggagatggacagcccca
gctcttcaggacccctacgtgtttatgccatgtgtctcaggagctgcagtaccccatctc
tacagcacgggggcgtggtatgggatggatgtaccagggcccagccccagagagagaggc
tcccgggagcggaggggggagagggcgagggcgagcatcctcaagagcccaggggtccca
gaggtggggaggctgtcccgagaggagctgacagagctgctgcagaggagcctgatctac
agagccggtcctcttgtggctctcaataaacctcctggactgcccataacaggtgacgag
ctgtctctgagcaccgtactgcctgacctgcagggggcgctgtctctcacgggggagctg
catgtggtgaaaaccgcagcccgagaccaatcaggactggtcctgctgtctacgtgccat
cacaccaccaatcaccttgaagataactttcgcaaagccaggaggcagaagacccctacc
gccacctactgggcagtgacagtggggactccggacccccccgagggagagatcgacgtg
ccacttaagctgcagaccatcggggcgcttcagctggtggttcctgagctcagtccctcc
agaggcagtgtgactcacagggaggtgaagaggactcgaacccgataccgagtgctcgac
tcgggggccggctgctccctgctgcagctgcagcccctctccaccttccagagccagctg
caggtacacctcagtgtgaagctcagcccagtgctgggggaccatgtctactcacccagg
gtgggccgagtcctgggggtgcccatctcgctgcctgtggagaccgccctgccacgcaca
caggtcctgcaggaggcgctcttgcgcaggatgcatctcacacagcagcagatgcaccgc
atgcccctgcacctccacctgctgcagctgcatctccctgccctggggaaggagcgaaag
gagactgtagtcacagccccgcccccagaatactttctcagaactctgtgtttgctggga
ttaacacctcctgaggggaggggctaa
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