Polyodon spathula (Mississippi paddlefish): 121329353
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Entry
121329353 CDS
T07273
Symbol
thoc7
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121329353 (thoc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121329353 (thoc7)
03041 Spliceosome [BR:
pspa03041
]
121329353 (thoc7)
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121329353 (thoc7)
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121329353 (thoc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
OVT1
Terpene_synth_C
DASH_Dad2
FapA
Suppressor_APC
DUF1664
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
121329353
NCBI-ProteinID:
XP_041130856
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All DBs
Position
16:32898709..32904291
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AA seq
204 aa
AA seq
DB search
MGSVTDDEVIRKRLLIDGDGAGDDRRINVLLKSFIKWCNSGSQEDGYTQYQRMLGTLGQC
EFSMGKTLLVYDMNLKEMENYEEIYTEIGQNLTAAHEKIAECKKEILQAKRIRKNRQEYD
ALAKVIQQHPDRHDTLKQLESLDKELQHLSQIKENVEDKLELRKKQFHVLLSTIQELQQT
LENDEKFSDADEQQENQMETETGH
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgggatctgtgaccgacgatgaggttatccggaagcggcttctgattgacggtgatgga
gctggtgatgatcggcgcattaatgtgctattgaagagcttcatcaagtggtgtaactct
ggatcccaggaagacgggtatacacaataccagcgtatgttgggtaccctgggacaatgt
gaattctcaatggggaaaacgttactggtctatgacatgaacctaaaggaaatggaaaac
tatgaagaaatctacacagaaatagggcagaacttaacagctgcacatgaaaaaattgct
gaatgcaaaaaagaaattttacaagcaaagagaatacgaaagaaccggcaagaatatgat
gcgttagcaaaggttattcagcagcaccctgacaggcacgacacattgaagcagcttgaa
tcgcttgacaaagaactgcagcatctgtcccagataaaagaaaatgttgaagacaagctt
gagctgaggaagaaacaatttcatgttttgctaagcaccatccaggaacttcaacaaaca
ctggaaaatgatgaaaagttctcagacgctgacgaacagcaagaaaaccaaatggaaaca
gaaactggacactga
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