Polyodon spathula (Mississippi paddlefish): 121329364
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Entry
121329364 CDS
T07273
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-9-II-like
KO
K04810
nicotinic acetylcholine receptor alpha-9
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121329364
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121329364
Ion channels [BR:
pspa04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121329364
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
OVT1
Motif
Other DBs
NCBI-GeneID:
121329364
NCBI-ProteinID:
XP_041130874
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All DBs
Position
2:5867037..5877746
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AA seq
487 aa
AA seq
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MMMSARMKNCVFSYLLKCLSFSVLFRVADSAQGKYAQMLFHDLLQDYSNALRPVEDTDKA
LNVTLQITLSQIKDMDERNQILTAYLWIRQTWYDAYLKWDKDDYDGLDSIRLPSNLVWRP
DIVLYNKADDEYSGPVDTNVVLRYDGQITWDSPAITKSSCVVDVSYFPFDNQQCNLTFGS
WTYNGNQIDIDMGMDSGDLSDFVENVEWECHGMPAAKNVIMYGCCSDPYPDITYTLLLKR
RSSFYIFNLLIPCVMISFLAPLGFYLPADSGEKVSLGVTVLLALTVFQLMVAESMPPSES
VPLIGKYYIATMTMITASTALTIFIMNIHHCGAEAKPVPDWAKVFILDYMSKIFFVYEVG
ENCTTSQKEKEKEAKLQMKENASAKVQGEASMSHNKYNVSAADKPNGHPNADLKEEHSPE
NINLYMCTCAHHNKITKNIEYIANCFREQKATCAKGAEWKKVAKVMDRFFMWVFFIMVFL
MSISIIR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtcagcaagaatgaagaactgcgtcttcagctacctgttgaagtgcctcagc
ttttctgtgctgtttcgagttgcagattcagcacaagggaaatatgcacagatgctgttt
cacgatttactccaggactactcgaatgctttgaggccagtggaggacacagacaaggcc
ttaaatgtcaccctgcaaatcaccctctcgcagattaaagacatggatgaaaggaatcag
atcttgaccgcgtacctgtggatcaggcagacctggtatgatgcctatctcaaatgggac
aaggatgactatgatggccttgacagtatccggctccctagcaatctggtatggagacct
gacattgtcctgtacaataaggcagatgatgagtactcgggaccagtagacaccaatgtt
gttttgaggtacgatggtcaaataacttgggattccccagcgataacaaagagctcctgt
gttgtagacgtgtcctacttcccgtttgacaatcagcagtgcaaccttacctttggctcc
tggacctacaatggcaatcagatcgatattgacatgggaatggacagcggggatctgtcg
gactttgtggagaatgtggagtgggaatgccacggcatgcctgccgctaagaacgtcatc
atgtatggctgctgctcagacccttaccctgacatcacttacactctgcttctcaagcgg
aggtcgtcgttttacattttcaacctcctgattccctgtgtgatgatatctttcctggcc
cctctggggttttacctgcctgcagactcaggagagaaggtttccctgggagtgaccgtc
ctcctcgccctcactgtgtttcagctgatggttgctgagagcatgccgccttctgagagt
gtacccttaataggtaaatattacatagcgacgatgacaatgattacagcatccactgca
ctgactatttttattatgaatatccaccactgtggagcagaagcaaaaccggtaccggat
tgggcaaaagtgttcatactggactacatgtccaagatattcttcgtctacgaagtaggt
gagaactgcacaacgtctcaaaaggaaaaagagaaagaggccaagctgcagatgaaggaa
aatgccagtgcaaaagtacaaggtgaagcatccatgtctcataacaagtacaatgtatct
gctgcggacaaacccaacggccacccaaacgcggatctgaaagaggaacattcccctgag
aacattaacctgtacatgtgcacctgcgcccatcacaataaaattacaaagaacattgaa
tatatcgccaactgctttagggagcagaaagccacctgtgcaaaaggagccgagtggaag
aaagtggccaaagttatggacagattcttcatgtgggttttctttatcatggtgttcctc
atgagcatttccattatacgatag
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