Polyodon spathula (Mississippi paddlefish): 121329411
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Entry
121329411 CDS
T07273
Name
(RefSeq) poly(rC)-binding protein 4-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121329411
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121329411
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
121329411
NCBI-ProteinID:
XP_041130942
LinkDB
All DBs
Position
16:complement(29040966..29077938)
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AA seq
454 aa
AA seq
DB search
MRLPASDSQTIMNCEQDLVEEGLNVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARV
NISEGSCPERIITMTGTMDAVFRAFTMITLKLEEDLSTLVSNGAVTSKPPVTLRLVIPAS
QCGSLIGKGGSKIKEIRESTGAQVQVAGDLLPNSTERGVTISGTPDAIILCVKQICAVIL
ESPPKGATIPYRPSPAPGSVILSGNQVLNEAHDFGYHPFFSMAQESLQLQHHAYSLQNQY
GIPHSELVKLHQLSMQQSTLAPMGQTTSAVLPGMEATSQTTSQELLIPNDLIGSIIGRQG
SKINEIRQVSGAQIKIGNQLDGTSDRHVTITGSPVSINLAQYLITSCLETAKSTAQPSSI
TTPVDLNMTFTQPASPASSSAAVLAAMSGMPHGHMLGAPYALPLSSLLGMKSVPFLTLSA
PSAASHGTLASYTSKISSANNGIKKPERQKFAPY
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctccctgcctccgactcccaaaccataatgaactgtgagcaagaccttgtcgaa
gaggggctgaacgtcaccctcactctgaggctcctcatgcatgggaaggaagttggcagt
attataggaaagaaaggagaaacagtgaaaagaattagagaagagagcagcgcacgtgtc
aacatctcagaagggtcctgtccagaaaggatcatcaccatgacaggcacaatggacgcc
gtgttcagagctttcaccatgatcacactcaaactggaggaggatctcagcacgttggtg
tcgaatggtgcagtcaccagtaaacctccagtgaccctgcggctcgtcatcccagccagc
caatgtggctcgctcataggcaagggaggctccaagatcaaggaaatcagggagagcaca
ggtgcacaagttcaggtagcaggagacctactacccaactccacagagcgaggtgtgacg
atatctggtacgccagatgcaatcatactgtgtgtcaaacagatctgcgcagtcattctc
gagtctccgcctaaaggtgccaccattccgtatcgccccagtcccgccccaggttcagta
attctctcaggcaatcaggttctcaacgaagcccatgattttggttatcacccattcttt
tccatggctcaagaaagtctgcagctgcaacatcatgcctattcactgcagaaccaatac
ggcattccacattcagagttggtcaagctccaccagctgtctatgcagcagagcaccctt
gctcccatgggccagacaaccagtgctgtccttcctggaatggaggccacttctcagaca
acatcccaggagcttctcattccaaatgatctgattggctccatcattggccggcaagga
agcaaaatcaacgagataaggcaggtgtctggagcacaaatcaaaatcggtaatcaactg
gacggtacgagcgatcgtcacgtgaccatcactggctctccagtcagcatcaacctggca
cagtacctcatcacctcatgtttagagaccgcaaaatccactgcccagccctcctccatt
acgacccccgttgacctcaacatgaccttcacccagcctgcctcccccgcctccagctcg
gctgcagtgctagcggcaatgagcggcatgccccatggtcacatgctgggggctccatac
gcccttcccctgtctagcctcctgggaatgaaatccgtccccttcctcactttgtctgca
ccctctgctgcatcccatgggaccttagcttcctacacgtccaaaatttcctctgccaac
aatgggatcaagaagccagagaggcagaagttcgctccatactga
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