Polyodon spathula (Mississippi paddlefish): 121329481
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Entry
121329481 CDS
T07273
Name
(RefSeq) proteasome subunit alpha type-1
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121329481
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121329481
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pspa03051
]
121329481
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121329481
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
121329481
Peptidases and inhibitors [BR:
pspa01002
]
Threonine peptidases
Family T1: proteasome family
121329481
Proteasome [BR:
pspa03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
121329481
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121329481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
121329481
NCBI-ProteinID:
XP_041130980
LinkDB
All DBs
Position
17:complement(6635826..6641462)
Genome browser
AA seq
262 aa
AA seq
DB search
MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSRTHAVLVALKRAQSELAAHQ
KKILHVDSHVGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPT
QRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCKAMSIGARSQSARTYLERHMDGFL
DCNLNELVKHGLHALRETLPAEQDLTTKNVSIGVIAKDMEFTIYDDDDVAPFLEGLEERP
QRKVVPPTEEPAAEKAEEPMEH
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtaatcagtatgacaacgatgttactgtgtggagcccacagggccgtatccat
cagattgaatatgcaatggaagcagtgaaacagggttcagccactgttgggctaaaatcc
aggacccatgctgtgctggtggcattgaagagagctcagtctgaactagctgctcaccag
aagaaaatccttcatgtagacagccacgttggtatttccattgctggcctcacggctgat
gcaaggcttctgtgtaattttatgcgccaggagtgtcttgactccaggttcgtgtttgac
agaccccttcctgtttcccgcttggtctccttgattggaagcaaaacccagattcctaca
caacgttatggcaggagaccatatggtgttggattgcttattgcaggttacgatgacatg
ggacctcacattttccagacatgtccttcagccaactattttgattgtaaagcaatgtct
attggagccagatctcaatctgcacgcacctacctggaaagacacatggatggatttctt
gactgtaatttaaatgaacttgtcaaacatggcctgcatgctttaagagagactcttcct
gcagaacaggacctcaccacaaagaatgtctccattggagttattgccaaagatatggag
ttcactatctatgatgatgatgatgttgcaccattccttgagggccttgaagaacggcct
cagagaaaggttgtcccacctactgaagagcctgctgcagaaaaagcagaggaaccaatg
gagcactga
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