Polyodon spathula (Mississippi paddlefish): 121329561
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Entry
121329561 CDS
T07273
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121329561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pspa03051
]
121329561
Proteasome [BR:
pspa03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121329561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
AAA_5
AAA_22
RuvB_N
PRS7_OB
nSTAND3
DUF815
Prot_ATP_ID_OB_N
AAA_14
AAA_7
Csa3_N
AAA_11
TIP49
AAA_lid_PRS2_C
AAA_33
RNA_helicase
bpMoxR
AAA_3
NPHP3_N
Mg_chelatase
AAA_18
DUF5906
AAA_28
AAA_24
TsaE
ATPase
NACHT
AAA_25
Occludin_ELL
AAA_17
DUF3829_2nd
Parvo_NS1
ATPase_2
IstB_IS21
DUF4140
COG4_N
Motif
Other DBs
NCBI-GeneID:
121329561
NCBI-ProteinID:
XP_041131136
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All DBs
Position
17:32796433..32802546
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AA seq
389 aa
AA seq
DB search
MADPREKGLQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFLRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHSGPITKHGEMDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHE
YVTQEDFMKAVRKVADSKKLESKLDYKPI
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccccgagagaaagggctgcaagactacaggaagaaattactggagcacaaa
gagatcgacggacggctcaaagagttgagggagcagctgaaagaactcacaaagcagtat
gaaaaatcagaaaatgacttgaaagcgttacaaagcgttgggcagattgtcggagaggtc
ctgaaacagctaacagaagagaaattcatcgtaaaggcgacaaatggacctcgctatgtt
gttggctgccgtcgacagcttgacaagtccaagctcaaacctggcacaagagtggcgctg
gacatgaccaccctcactatcatgaggtacctgccccgagaggttgaccctctggtgtac
aacatgtcccacgaggaccctggcagtgtctcctattcagagatcgggggattgtcagaa
cagatccgggagctcagagaggtgattgagcttcccctcacaaaccctgagcttttcctg
cgtgtggggatcatccctcccaaaggctgcctgctgtatggaccaccaggcacagggaag
acgttgttggccagagctgttgccagtcagctggactgtaatttcttaaaggtggtctcc
agttctatagttgacaagtacattggggaaagcgccaggctgatcagggagatgttcaac
tacgccagggatcaccagccctgtatcatcttcatggatgagattgatgctattggtggg
cgtcgattttctgagggcacctcggctgaccgagagatccagaggaccctgatggagctg
ctgaaccagatggacggcttcgacacgctgcacagagtcaagatgataatggcgacgaat
cgtcctgacaccctggaccctgccctgctgcgcccgggtcgcctggaccgcaagatccat
attgaactgcccaatgaacaggcacgcttggacatcctgaaaattcactctgggcccatc
acaaagcacggagaaatggattatgaggcgattgtgaagctctccgatgggtttaacgga
gctgatttgagaaatgtgtgtaccgaagcaggcatgtttgcaattcgtgctgaccatgag
tatgtgacccaggaagacttcatgaaggcagtccgtaaggtggcagactctaagaagctg
gaatccaagctagactacaagcctatataa
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integrated database retrieval system
