Polyodon spathula (Mississippi paddlefish): 121329590
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Entry
121329590 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-1-like isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121329590
04082 Neuroactive ligand signaling
121329590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121329590
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121329590
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121329590
NCBI-ProteinID:
XP_041131183
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Position
2:complement(7108294..7159082)
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AA seq
470 aa
AA seq
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MDSERARFVLVLPPFLCRRAGLIMWLLAYLGLSGCVTFGPHKMEEDYEDAPINKTWVLAP
KVHENDVTLILNKLLQGYDNKLRPDIGVRPTIIETGVYVNSIGPVDPINMEYTIDIFFAQ
TWYDSRLKFNSSMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWKDGRVL
YTLRLTINAECYLNLHDFPMDEHSCPLEFSSYGYPKNEILYRWKRNSIEVADQRNWRLYQ
FSFVGLRNTSEVARIQSGDYIIMTVFFDLSRRMGYFTIQTYIPCILIVVLSWVSFWINKD
AVPARTSLGITTVLTMTTLSTISRKSLPKVSYVTAMDLFVSVCFIFTFAALMEYGTLHYF
TSNRKPKKDQAKKSNQAPPKSSVIDIRPRSTLLQVNNMAYFQEQNDYACECLDGKDCSSF
FCCFEDCRTGAWREGRAHVRVSKIDTYARIFFPTAFGLFNLVYWVGYLYL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggattccgagagagctagatttgttttggttcttccaccgtttctatgcagaagggca
gggttgattatgtggctgctggcttatcttggactcagtggatgtgttacatttggccca
cacaaaatggaagaagactatgaagatgccccaattaataagacatgggttttagcacca
aaggtccatgaaaatgatgtcacccttattctgaataaattactccaaggatatgataac
aaactcagaccagatattggagtgaggccaacaataattgaaactggtgtatatgtaaac
agtattggacctgttgatcctataaatatggaatatacaattgacatattctttgcccag
acatggtatgatagccgactgaagttcaatagttctatgaaagtgctcatgctgaatagc
aatatggtgggcaagatctggatcccagatacattttttcgaaactcaaggaaatcagat
gcccattggataacaacacctaaccgtctacttcgactgtggaaagacgggagggtcctc
tacacattaaggttgactattaatgcagaatgctaccttaacctgcatgactttcctatg
gatgagcactcctgtccactggagttttcaagctatgggtatccaaaaaatgaaattctc
tatagatggaaaagaaattcgatagaagtagcagatcaaagaaactggagactctaccaa
ttttcatttgtagggttacgaaatacttcggaagttgcacgcattcaatccggagattat
ataatcatgacagtattttttgatctgagcagacggatgggctactttaccatacaaaca
tatattccttgcatcctgatagttgttctttcgtgggtgtcattctggattaacaaagat
gcggtgccagccaggacatcattaggtattactacagtattgacaatgacgacactgagc
actatttcaaggaagtccttgccaaaggtgtcttacgttacagctatggacctctttgta
tcagtgtgcttcatctttacatttgctgcactgatggagtatgggaccttgcattacttc
actagcaacagaaagccaaagaaagaccaggcaaagaagtcaaaccaggcgcctccaaag
tcttccgtcatagatatccgaccaagatcaacgctacttcaggtgaacaacatggcctac
tttcaagaacaaaatgattatgcatgtgagtgtcttgatgggaaggattgctccagcttc
ttctgctgttttgaagactgtcgtacaggagcttggagagaagggagagcgcatgtccgg
gtttcaaaaattgatacctatgccaggatcttctttccaactgcatttggtttgtttaat
cttgtttattgggttgggtatctatacctgtaa
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